NONHSAT060717
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060717 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1212 nt |
Genomic location |
chr19+:5847478..5858250 |
Exon number |
4 |
Exons |
5847478..5847779,5852515..5852684,5854582..5854673,5857627..5858250 |
Genome context |
|
Sequence |
000001 CCACCGCCTA TCCCAAAACC TATAAGAACC AATGATAATC CCACCACCCT TTGATGACTC TCTTTTTGGA CTCAGCCCGC 000080
000081 CTGCACCCAG GTGAAATAAA CAGCCTCGTT GCTCACACAA AGCCTGTTTG GTGGTCTCTT CACACGGACG CATGAGACAT 000160 000161 TTGGTGCCGA AGACCCGGAT CAGCGGGACT CCTTCGGGAC AGCAGTCCCC TGTCTTCACC TTCACTCCCT GAAGAGATCC 000240 000241 ACCTACAACC TCAGGTCCGC AGACCAACCA GCCCAAGGAA CATCTCACTG ATTTTAAATT GGACTCTCTT CACACGGGCG 000320 000321 AGTGTGACAT TTGGTGCCGA AGACCCAGGA CAGGAGGACT CCTTTGGGAG ACCGGTCTCC TGTCCTCGCC CTCACTCCGT 000400 000401 GAGGAGATCC ACCTGCAACC TCAGGTCCTC AGACCAACCA GCCGAAGGAA CATCTCACCA ATTTCAAATG GGCTTAGCGG 000480 000481 CTGAAGACTG ATGCTGCCTG GTCGCCTCGG AAGCCCCCTG GACCATCATG GACGCCGAGC TTCGGGTAAC TCTCACAGTG 000560 000561 GAGGCCTGTT TGGTGACTTT CTTCGCACCG ACGTGCGTGA CACAATGTTT GCAGAATATG AAGGTGGCTG TCACGTGGTC 000640 000641 TGGGCTTCCT GGAGGTTTGA GCTGGGAGCT GAAGCCCCGT AGGAGTTCTG TAAGTCAAAA GGGAAGAGAA GAGCATTCCA 000720 000721 CGTAGAGAAA AGAATCTGTG CTCCAGGCGC GGTGGCTCAC GATTGTAATC TCAGCACTTG GTGTCAGGCC TCTGAGCCCA 000800 000801 GGCTAAGCCA TTGTATATCC CCCGTGACCT GCATGTATAC ATCCAGATGG CCTGAAGCAG CTGAAGAACC ACAAGAGAAG 000880 000881 TGAAAATAGC CAGTTCCTGC CTTAACTGAT GTCATTCCAC CATTGTGATT TGTTCCTGTC CCACCTTTAC TGATCAATTA 000960 000961 ACTTTGTGAC ATTTCTTCTC CTGGACAATG AGTCTCATGA TCTCCCTACC CAGCACCTTG TGACCCCTGC CCCTGCCCGC 001040 001041 AAGAGATAAC CATCTTTAAC TGTAACTTTC CACTACCTAC CTAAATCCTG TAAAAACTGA CCCACCCCCT ATCTCCCTTT 001120 001121 GCTGACTCCT TTTTCGGACT CAGCCCGCCT GCACCCAGGT GATTAAAAAG CTTTATTGTT CACATGAAAA AAAAAAAAAA 001200 001201 AAAAAAAAAA AA |
Predicted Small Protein
Name | NONHSAT060717_smProtein_527:724 |
Length | 66 |
Molecular weight | 7182.2237 |
Aromaticity | 0.0615384615385 |
Instability index | 48.3323076923 |
Isoelectric point | 7.74139404297 |
Runs | 13 |
Runs residual | 0.0497115384615 |
Runs probability | 0.0239085239085 |
Amino acid sequence | MDAELRVTLTVEACLVTFFAPTCVTQCLQNMKVAVTWSGLPGGLSWELKPRRSSVSQKGR EEHST |
Secondary structure | LLLEEEEEEEEEEEEEEEELLHHHHHHHHLLLEEEEELLLLLLLLEEEELLLLEEELLLL EEELL |
PRMN | - |
PiMo | - |