NONHSAT060909
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060909 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
784 nt |
Genomic location |
chr19+:8547433..8550607 |
Exon number |
2 |
Exons |
8547433..8548095,8550487..8550607 |
Genome context |
|
Sequence |
000001 AGCACACCCA GCTCATTTCA GGCAAGGCTG GCATGCTCAA GGATTTCCGC GCAGAGCTCA TTTGTTAGCG TTGAGGTTGT 000080
000081 CCGTGGAGCT GCAGCTTTAA TTTGCTCTAT GATAATGAGA GGTGCCTCTG GGTGGATAAA TGTGGGCTCC AAGTGGGTGA 000160 000161 TGCTGGGCGG TCTTCTGAAC AAGAAGTTGG CTGGGGTGGG GGTGGGGGCT TACTTTCCAG CTCAGGGGAG GCAAGGAAGC 000240 000241 CTCAGTCCTG AGAGCCTGGA CCAGCTTTAG AAAACTGCCG CTGAGCGAGA CCCGATGGCC CTCTTCTTGC TCTGGCTCTC 000320 000321 AGTTCATGAA TGCATATGAC TCCTATCTCT GCTGGGCGCA TTCGCAGGTG ACCCCGCACG CTGGGCCTCA GACTCTGGAG 000400 000401 CTACGTGGGG TCTTGGCATC GTGACCCAGC ATCAAGGACT CTCCTAGTTC TCTGTAAAAT GATCTTGTCT GTGCGTGTGT 000480 000481 TTCTCAAACC CCTTTCCCTT TATCTTGTCA TTTTTATTAG TAGTATTTCT ACTCTGGAAT CTGTAATGAG CACATTTCTA 000560 000561 TTGCCATAGA GGAATTTGGC TAATTTTTTT TTCTTCCTGA TTTCCTTAGA AATCCTAAGT AATGCACTGA AGAGAGGAGA 000640 000641 GATCATTGCA AAGCAGGGAG GAGGTGGAGG TGGAGGAAGC GTCCCTGGGA TCGAGAGGAT GGGTCCTGGC ATTGACCGCC 000720 000721 TCGGGGGTGC CGGCATGGAG CGCATGGGCG CGGGCCTGGG CCACGGCATG GATCGCGTGG GCTC |
Predicted Small Protein
Name | NONHSAT060909_smProtein_458:568 |
Length | 37 |
Molecular weight | 4058.9684 |
Aromaticity | 0.111111111111 |
Instability index | 42.3027777778 |
Isoelectric point | 8.34417724609 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0384838620133 |
Amino acid sequence | MILSVRVFLKPLSLYLVIFISSISTLESVMSTFLLP |
Secondary structure | LEEEEEEEELLLLEEEEEEEELHHHHHHHHHHHLLL |
PRMN | LLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | iiiiiiiiTTTTTTTTTTTTTTTTTTTToooooooo |