NONHSAT061031
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT061031 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1041 nt |
Genomic location |
chr19-:10228774..10230596 |
Exon number |
5 |
Exons |
10228774..10229403,10229544..10229742,10229764..10229847,10230330..10230376,10230516..10230596 |
Genome context |
|
Sequence |
000001 TCGTTTTCGC CCGCTTCCGC TCTCTGGCCG GGCTTGGGCT GCGTGGAGAA TACTTTTTGC GATGCCTACT GGAGACTTTG 000080
000081 ATTCGAAGCC CAGTTGGGCC GACCAGGTGG AGGAGGAGGG GGAGGACGAC AAATGTGTCA CCAGCGAGCT CCTCAAGGGG 000160 000161 ATCCCTCTGG CCACAGGTGA CACCAGCCCA GAGCCAGAGC TACTGCCGGG AGGTGAGTGA GGACTGCCAC TCGGTGTCCG 000240 000241 GGCTGCCTCT CCCTCCAGCC CTGCCGCTCC TGATCCCCAT GACCCAGGGC TCAGTCTTTC TCTGTTTTTC CCCTTCTGCC 000320 000321 AGCTCCACTG CCGCCTCCCA AGGAGGTCAT CAACGGAAAC ATAAAGACAG TGACAGAGTA CAAGATAGAT GAGGATGGCA 000400 000401 AGAAGTTCAA GATTGTCCGC ACCTTCAGGA TTGAGACCCG GAAGGCTTCA AAGGCTGTCG CAAGGAGGAA GGTGAGGCTC 000480 000481 TTCTTCCCCA GGGCTAACCT AGAGGAATTG GAAAACCGTG CTCCCGGACT TTGTGTTTAG AGATGGGGCT TAACtctttt 000560 000561 tttttttttt ttttgagaca gagtgttgct ctgtccccca ggctgaagtg cagtggcacg atctcgactc actgcaacct 000640 000641 ccgcctcctg ggttcaagtg attctcctgc ctcagcctcc cgagtagctg gggttacagg catgtgccac cacgccagct 000720 000721 aatttttgta cttttagtag agacggggtt ttgccatgtt ggccaggctg gtctcgaact cctgacctca catgatctgc 000800 000801 gcacctaggc ctcccaaagt gttgggatta caggtgtgag ccatcgcacc cggccAGGCT TACCTCTTTG TACCTATTTT 000880 000881 GTTGAAGCTG AACTGAGGCC TGGGGTGCTT GCACTGTCTT GGGGCCCTGA AAAGTCCAAG GCACAGCAGT CGATAAATAG 000960 000961 CAACTAAATA AATGATGATA AATATCTAAT CAAAGTTCGA TGATAGATAT CAAATTATAT TAATAAATAT CAAATAACAT 001040 001041 C |
Predicted Small Protein
Name | NONHSAT061031_smProtein_542:721 |
Length | 60 |
Molecular weight | 6260.152 |
Aromaticity | 0.0847457627119 |
Instability index | 53.5152542373 |
Isoelectric point | 9.80035400391 |
Runs | 11 |
Runs residual | 0.0419841393251 |
Runs probability | 0.0426201602672 |
Amino acid sequence | MGLNSFFFFFLRQSVALSPRLKCSGTISTHCNLRLLGSSDSPASASRVAGVTGMCHHAS |
Secondary structure | LLLLHHHHHHHHHHHHLLLLLLLLLEEEELLLLEEELLLLLLLLHHHHHLLLLEEELLL |
PRMN | - |
PiMo | - |