NONHSAT061225

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT061225

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3246 nt

Genomic location

chr19+:12203151..12211603

Exon number

4

Exons

12203151..12203285,12204651..12204710,12204881..12204999,12208672..12211603

Genome context

Sequence
000001 CTTTCTGGCT CTTGGAACGC TCGGCTCTGA GAGGCTCCAG GTTTCTCCGC CAGAGCTCCT GTCGCTCTGT CAGTTGCGCT 000080
000081 GTGTTCCTCT CTAGTCACAA GAGCCTTGGG GAAGACAGTT GGAAGCTCAG ACATGAGAAA TATGATTCCA CAGGACAATG 000160
000161 AAAACCCACC CCAACAGGGT GAAGCAAATC AAAATgattt cgctcttgtt gcccaggctg gagtacagtg gctcgatctc 000240
000241 ggcccacagc tgcctctgct tcctgggttc aagcaattct tctgcctcag cctcctgagt agctgtggtt acagttggag 000320
000321 tcttgctctg tcacccaggc tggagtgcag tggcgcaatc tcagcttacg gcaagctccg cctcccgggt tcatgccatt 000400
000401 ctcctgcctc agcctcccga gtagctagga ctacaggcgc ccgccaccac acccggctaa tttttgtatt tttagtagag 000480
000481 acaaggtttc accgtgttag ccaggatggt ctcgatctct tgacctcgtg atctgcccac ctcggtctcc caaagtgctg 000560
000561 ggatgacagg cgtgagccac catgtccagc Tgtaacttag aactatttaa agaggcaaag gcataggaga ataaaggaag 000640
000641 gaagaagtaa ctcgtggaat gttgcgaaag gaaaaacacg tttaaggaag aggaacaggc tatgacttaa tgtttgcttg 000720
000721 gaccagtata agcatgccag ggcaagtatt taggctaact tgtgggagtt aagaatataa agttgccaag accagcttgg 000800
000801 ctggggagac gctaacccag cagcgctaga ggaattaaag acaccacaca caccaaaata tagaggtgtg aagggggaaa 000880
000881 tcaggggtct cacagccttc agagctgaga gtcttgaaca gagatttatc cacatattta ttaacagcaa accagtcatt 000960
000961 agcattgttt ctatagatat taaattaact aaaagtatcc cttatgggaa acaaagggat gagccgaatt aaaggaatag 001040
001041 gttgggctag ttaactgcag caggagcatg tccttaaggc acagatagct catgctacta tttgtggctt aagaatgctt 001120
001121 ttaagcggtt ttccgccctg ggcgggccag gtgttccttg ccctcattct ggtaaactca caaccttcca gtgtgggtgt 001200
001201 tagggccatt atgaacatgt tacagtgctg cagagatttt gtttatggcc agttttgggg ccagtttatg gccagatttt 001280
001281 ggggggcctg ctcccaacat gtcccctttc tttgatttgc aaatcaataa aagcaagggc agctttgtca cagtgagcta 001360
001361 cttctcgcag gagtcaggat ccacgtctgc agactataca aggacaacac agattaaaag cacagtcatc attgaaatca 001440
001441 cagaacttcc aagtgttttt atccattttc agctcctttt aagcactcca gttctggcat taaggtcagc tgtgcctggg 001520
001521 atgctttaaa tatttgttct tttaatttta aatccttata ttaagctcct acaatgcacc atatcatttg aggttgaggt 001600
001601 gccactatac cgccatggtt ccagataata ggaacttttg ccatacttct tatcatttct gccatctgac cgttttgttc 001680
001681 agatcagctg aacatagtgt ggccgtggca tgtagactga gaggtgcagt ttaagctaaa catcccctta ggggaccaat 001760
001761 taataatgat tccatagaaa ttgttgtgca gcacctctgc ctgttccgca atgcaatctt cctaaacaag tacgttcatt 001840
001841 ttttctaact gggtccgatc ctgtttacaa ataggttttt gagggcggta tgcctcaatt ataggagcag atttattacg 001920
001921 gtaaatactg agattagaaa gcatgtgtaa ctgtgtcata gagtgattgc atccaggcat tattaccagt caagattgat 002000
002001 aaatatgccc agtaagtata atcattctct gtgtcagccc ttattgaagg aatactcaag gtagtggtga taactgctgt 002080
002081 catagctacc attaaattat tcattgtgac tggttgtccc gctttcctca ggttttcttc cgccatctgt gacagcttct 002160
002161 tgatctgtcc ccaggtgggt ggctgtgttc gatgggtgtt gctcgtgaca gttggggtcc tcctcagcgt cagtctctac 002240
002241 atggctgcaa ccggggagtc cttgggatcc tctcagagtc tcttcctcag catctggctc atgataaggt ttcaggtgtc 002320
002321 ttgatagtac ccaaatcggc tattgatttt ggtctagaga aacacaagca taatctctac tccaagttat tattttacct 002400
002401 atttcccaac tttttgttac tgaatatctc caccaaatca gttgttctgc ttctttcttt gcagctggtt tctgtagatg 002480
002481 ctgttcagtt gctgataaca tctggccttt gggcaggttc aaaacattta atgttaataa tgctacgttc agttgtatct 002560
002561 gtggggttcc atattctcta tttccccctt tctgcttttg caactgctgt tttagggaaa gattcattct ttccactatg 002640
002641 gcttgtcctt gaattgtatg ggatatcagt aatgtgttta atattccaca tagagaaaaa tgtagctaga gcttggctag 002720
002721 tatagcctgg ggcattatct gttttaatag aagctggaat gcccatcact gcaaaacact gcaaaagatg acgtttaaca 002800
002801 caagcagaag actctcctgt tggcatgtag cccagacaaa gtgagaaaag gtgtccacac atacatgtgg gcaccaaacg 002880
002881 agggaatatg tgtgacatct atttgccaaa gagagttagg ttccaatcct tgaggattaa atcctcctgt aaaagatgag 002960
002961 gaatgtacca tttggcaagt tggcatcgct ggataatagc tttagcttct ttccaggtaa tgctgtatct gtgtttgagg 003040
003041 ccagaggcat taacatgggt taaattgtga aagtgtctag cattagatat tgcattagca actaggcgat cagccatttg 003120
003121 attcccttca atcaaaggtc ttggaagagg tgtatgagcc ctaatgtgag tgatgtaaaa agggtgcatt ctacttctaa 003200
003201 ctgctgtttg caactgggta aataaagtaa tcagttgttc atctgt
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Predicted Small Protein

Name NONHSAT061225_smProtein_1244:1528
Length 95
Molecular weight 10177.5488
Aromaticity 0.117021276596
Instability index 60.0563829787
Isoelectric point 5.56414794922
Runs 11
Runs residual 0.0117946345976
Runs probability 0.0724414253826
Amino acid sequence MASFGASLWPDFGGPAPNMSPFFDLQINKSKGSFVTVSYFSQESGSTSADYTRTTQIKST
VIIEITELPSVFIHFQLLLSTPVLALRSAVPGML
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLEEEEEEEELLLLLLLLLEEEEEEEEEE
EEEEEELLLLEEEEEELLLLLLHHHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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