NONHSAT062906

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT062906

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

892 nt

Genomic location

chr19+:17733256..17734147

Exon number

1

Exons

17733256..17734147

Genome context

Sequence
000001 TTTATTCCCC CTGCCTACAA ATGCATTGCC TGTGGTTGGG TATGCTGCCA CCAAGTGGTT ATAGCCAAAG ACCCAGGCTG 000080
000081 CAGCTACCAG GAAGTAAGAG CCCTTGTAAA CTTTTAACAA AGTGAAATCT TGTAACAGCC TTGTCTTGCC CACAAAGGGA 000160
000161 AAATCTGAAG TTGTTTTGTC TCTGCTCTTA CACATGTCTG CATATCACCA CCACCACCAC CACCACCACC ACCACCATTA 000240
000241 GCTCTGCCTC TGGGCCGGTC ACTGAGAGTG CAGTGGCGCG ATCTCGGCTC ACTGCAACCT CTGCTTCCTG GGTTCAGGCA 000320
000321 ATACTGAGAT GAGTATTTTA ATGCATCATG CCATTTGGTT CTTAGAACTA CCCTCAGGGA GGTGATGCAA TGAGCCCCAT 000400
000401 TTTCCAGACA AGGAAACAGA GGCTGGGAGG TCAAGTGACC TCCCAAGGTC ACAGAGAGAG ACAGTGGCTG GGCTAGGATT 000480
000481 TGACCCCAAG TCTACCTGAC ATCAAAGCCA TGACAAAAGT CTCCCACTTG GGCACCTGGG TGTATGTCTG GGATTGGTGT 000560
000561 GTGTCGGTGT GGATGGCGGG AGTTGGGTAG ACAGGGTGGT GGGGTACCAA GGAATGGTCT GGAGCATGGA ATTTCAGAGG 000640
000641 AATCAGAAGT AGAGACCCTC ATGGTGAGGA CCTGCATTCT GGGAAGCTGC TGACAGTTCA GAGCCCAAAG AGGAGGTCAG 000720
000721 AGGAATCCTG GGGTTGATCC TCTTTCTAGC TTCAGGGCGT CTGGTGACAT CTGGGCACGG GAGCAAGGTT GGATTCTACC 000800
000801 CTTAGACGGC AGGTCCGCTG CGAAGGAGGA GCTGGGCTTG GGGTTTGGGA GTGGGTAGTG GGGCTCCTCT GGACTTCAGT 000880
000881 GGGACAGGGA GG
[back to top]

Predicted Small Protein

Name NONHSAT062906_smProtein_20:124
Length 35
Molecular weight 3824.6084
Aromaticity 0.0588235294118
Instability index 89.8823529412
Isoelectric point 10.0602416992
Runs 5
Runs residual 0.0390915860015
Runs probability 0.0
Amino acid sequence MHCLWLGMLPPSGYSQRPRLQLPGSKSPCKLLTK
Secondary structure LLEEELLLLLLLLLLLLLLLLLLLLLLLHHHLLL
PRMN -
PiMo -