NONHSAT063615
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063615 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1103 nt |
Genomic location |
chr19+:20011787..20043805 |
Exon number |
2 |
Exons |
20011787..20011900,20042817..20043805 |
Genome context |
|
Sequence |
000001 TCTTCACTAC TCTGTGTCCT GTGCTCCTAC AGGCCCAGCC TCTGTGGCCC TGTGACCTGC AGGTATTGGG AGATCCACAG 000080
000081 CTAAGACACC AGGACCCCTG GAAGCCTAGA AATGGTGcac gcctgttatc ccagcacttt gggaggccaa ggtgggtgga 000160 000161 tcccgaggtc aggagatcga gaccatctgg ccaacatggt gaaatcccat ctctactaaa atacaaaaaa ttagccaggc 000240 000241 atggtggccc atgcctgtag tacgagctac tcaggaggtt gaggcagggg aatcactaga acccaggagg cactccagcc 000320 000321 tgggagacag agtgagactc catctcaaaa TATATATATa tttccaaata ttcagtttgg tcttattata ttgacattgt 000400 000401 tatgcaacat atcactagag tgttttttat cttgcaaagc taaatctcag tacacagtaa ataactacca atcctttgta 000480 000481 ttttgtggtt cttttcaaac accactctgt tttctgtttc taagagtata actgctttat atatctcatc caatctctgt 000560 000561 ctttttgcgg ctgggtcact ttattttgca taatgtcatc aatatttatc ttaatagttg ttacagtatt ttctgctttt 000640 000641 tgaaaactga gtgataattc cTGTACTTTT GTGTCTACTG AATGATTTGG TGACACAAAT TTCGATTACT TTTACCTAGT 000720 000721 GGCTTGCAGT AACAATGCTA CAATAATTAT GTGAAAGTTA ATGTAATATA TTTGCTGCat tctgttttat tagtctactt 000800 000801 tttcaccttt atactcatac caaattattt taattctgta gctttttgat gtgttttgaa atcagaaatg gtattgcctg 000880 000881 taacattgtt cctgtttttg aagattgctg ggtactttat tgtctgtttg gattccatat acttttaaat ttgttgtttt 000960 000961 tatttctttg aaaatgctgt gagtcatttg aaagacattg cattaaatct gtagattaaa ttgagcagta aagacatctt 001040 001041 caaaatattg tttttcaatT GTTTGTTTTT GAGATGGAGT TAAATTTACC TGCCTTACCA GTT |
Predicted Small Protein
Name | NONHSAT063615_smProtein_848:970 |
Length | 41 |
Molecular weight | 4740.7369 |
Aromaticity | 0.2 |
Instability index | 70.475 |
Isoelectric point | 4.64923095703 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0103212456154 |
Amino acid sequence | MCFEIRNGIACNIVPVFEDCWVLYCLFGFHILLNLLFLFL |
Secondary structure | LEEEELLLEELLLLLLHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooo |