NONHSAT063648
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063648 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1067 nt |
Genomic location |
chr19-:20451078..20607775 |
Exon number |
3 |
Exons |
20451078..20451910,20486769..20486818,20607592..20607775 |
Genome context |
|
Sequence |
000001 GAGCGAAGAG GACGGCTTTC TGGTATGGCG CGGCCTTTGT CTCTTGCTGC CGCTGGAGCT CCAGATCTCT TGTTCACTGC 000080
000081 TCTGTGTTCT CTGCTCATAG AGGCCCAGCC TCTGAGGCCC TTTGACCTGC AGGTATTGGG AGATCCACAG CCAAGAGCCA 000160 000161 GGACCCCCTA GAAGTCTAGA AATGcaagcc gaggtacttc tatagaaggg tgcaccctta cagatggagc aatgATGGAA 000240 000241 TTAAattcac ctgtctcggc cttccaaaat gctgggataa caggcatgag ccaccgcacc cagccCAGTT ATTTCAACAA 000320 000321 GTGCAtgctc aagagtgtgt tgtatcattt ctatatagct gtaaatttat caattattta tattattgtt ttatactcta 000400 000401 attccatttt ttgtcgtaga aggtaatcta tgaaatttcg gttttaaaaa atgtgttaag tctttgtttt tggcctatca 000480 000481 ggtggtttat aaagaagaat gttgaatgag ctattgagaa ggctgtgtat cccgatgttg ttgaggagtg ttctctatac 000560 000561 cttcattaga aattattgtt tttgactgcc ttttagtcct ctgttccctt actaatatca tcttgtttta ttattattac 000640 000641 agaaagtggg gtattgaaat atcctactat aattatattg ctctctctgt gtttattcag ttttgttagt atttacttta 000720 000721 tatatctgaa agcctaattt gagacacaca cacaaataca tgcatgtata aacaaatttg tcatacattc acagggaatg 000800 000801 aatctatgta ttgttaaatg tccttttttg tctgtttgaa gttttgactt aaagtacatt ttataaaata tgacagtttt 000880 000881 ttacttaaga tgtagcttgt gtaatattat tttgagctct tctgctctaa tttggttaat atttacatta aatttctact 000960 000961 tccatctcac cactttcagt ctttttttgt cattagatct caactgactc ttgtagaaag tcaagttgaa tcttgatttc 001040 001041 acagaatttt taataaacct ttttatt |
Predicted Small Protein
Name | NONHSAT063648_smProtein_869:1006 |
Length | 46 |
Molecular weight | 5296.2687 |
Aromaticity | 0.2 |
Instability index | 52.656 |
Isoelectric point | 6.48760986328 |
Runs | 4 |
Runs residual | 0.0733585858586 |
Runs probability | 0.0333200847908 |
Amino acid sequence | MTVFYLRCSLCNIILSSSALIWLIFTLNFYFHLTTFSLFLSLDLN |
Secondary structure | LEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTToooooooooo |