NONHSAT063653
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063653 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1446 nt |
Genomic location |
chr19-:20515776..20607775 |
Exon number |
3 |
Exons |
20515776..20516941,20519759..20519854,20607592..20607775 |
Genome context |
|
Sequence |
000001 GAGCGAAGAG GACGGCTTTC TGGTATGGCG CGGCCTTTGT CTCTTGCTGC CGCTGGAGCT CCAGATCTCT TGTTCACTGC 000080
000081 TCTGTGTTCT CTGCTCATAG AGGCCCAGCC TCTGAGGCCC TTTGACCTGC AGGTATTGGG AGATCCACAG CCAAGAGCCA 000160 000161 GGACCCCCTA GAAGTCTAGA AATGGTATTG TTCTCTCCAA GCCAGAACTG ATCACCTGTC TGGAGCAAGG AAAAAAACCT 000240 000241 CTGACCGTGA AGAGACATGA GATGATTGCC AAACCCCCAG agatggagtc tcgctctgtc acctagacgg aagtgcagtg 000320 000321 gtgcgatctc agctcactgc aacctctgcc ttttgggttc aagaaattct cctgcttcag cctctctagt aactcggatt 000400 000401 acaggtgccc gccaaaacgc tcagctaatt ttctgtattt ttagtaagat agcgtacatt atgttggcca agctggtctc 000480 000481 aaactcctga cctcaggtga tttgcccacc ttggcctccc aaagtgctag gattacaggc ttaagccact gcacctggcc 000560 000561 tgtgttacat attttgtata tagatatata aatgaggaac attaataaca ttttaaaata atgactacat ctttgttttc 000640 000641 caccaacaac caacatgggt ttcattttta ttgcatcatc aacagagttg gcatttttta aaaaatatat agtggccatt 000720 000721 ctaatgggtg tgagatgatt tcgctgtcat tgtgtttttt tttcatttct ctgcaaatga gtaattttgt gcatcctgtc 000800 000801 aaatgtttct tcccatttgt gtagtttttt gatgaaagtt ttgtttgttc atttataaat caagttattg aactttatgg 000880 000881 tttagttttt agagttgttg atatattttt aatattaact tttttcacat gtaatttgca aatatattca cccattttct 000960 000961 aaatatgttg tcattctcga attttctttt gatgtacaga aattttgaca tctactatag ttaatggttt ctattcttgt 001040 001041 atttgttgct catgcattta atgtcatatc taagaaaatg gtgccaagac aatgtcatgt ctttttcctg tattttttct 001120 001121 gaaagatttg ttagtttttt gtgtctaagt attttattta aaatatattt ttgtatcatt caagaaaata atccaacttt 001200 001201 attttatcga tgttgatatt cagttttcaa caccattttt tgaagagatg atttttctct attttgtact catggcaacc 001280 001281 ttttggaaga tcatttgatc atatacagaa gggttcattc cggagctctc tattctgttc tttcatctgt ttatctttgt 001360 001361 gtcagtatca cattgtttat gttactgtag ctttTAACTG TAGGTTGTAT TAACATCTTT GAAAAATAAA GTTTTTTGAC 001440 001441 CCCTGA |
Predicted Small Protein
Name | NONHSAT063653_smProtein_734:823 |
Length | 30 |
Molecular weight | 3430.1737 |
Aromaticity | 0.241379310345 |
Instability index | 48.8034482759 |
Isoelectric point | 7.84637451172 |
Runs | 4 |
Runs residual | 0.0616379310345 |
Runs probability | 0.0311561561562 |
Amino acid sequence | MISLSLCFFFISLQMSNFVHPVKCFFPFV |
Secondary structure | LEEEHHHHHHHHHHHHLLLLLLLLLLLLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | i???????????????????????????? |