NONHSAT063920
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063920 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
928 nt |
Genomic location |
chr19+:23627064..23627991 |
Exon number |
1 |
Exons |
23627064..23627991 |
Genome context |
|
Sequence |
000001 TTGTCTCCAG TAATATAGCA GTAGGAATGA TCTTATCTCA GACCATAGTT AAATAGTTGG ATTTTTTTTC TTCCTTGACA 000080
000081 TCAGATTTTC TTTAATTACC AGATGCACAT TGTGATACAC AGATTTGACT CTCAAGCACC TATGGCCAAC TCCTTGGTAC 000160 000161 TCTCCAAAAA GGTCCCTTAG ACAATGACTG ATTTGGAGTT GAAATATTTT TTCAGTAATA TTAGATAGAA AGTTGTTTTC 000240 000241 TGTATTCACA GAGTGGCCAC AGCATGTGCA TTGGCACCAT CTGCCTCTTG AGTATCTCCC AGGTCATCAC CATCAGCCCC 000320 000321 CAAAACCTCA GGTGAACGTA GCTTAAACTA CATGCTTCCA AATATATTTG AATCTCTAAT ATCCAAATTA TGTGCTGAAT 000400 000401 TCTGAATAGG CTTGTAAATG TCATTTTTTC CTGTGTATGT TACTGGTAAG TGGAACACCA TAAAGAACAC AAAGATTATT 000480 000481 TTAAACACTG TTCTGGAGTA GTTAATAACA GAATTCCACA TTTATGACAT GTCATGTTTT TATCATTTTT TAGTGTTTTG 000560 000561 TGTTTGGAAA TTATAACCTG GGCCAACAGC TCCATGACCT TTATTCTGTT CAACACAAGT GGTGGGTCCA ACATATTCAT 000640 000641 AGGTCCAACA CCACTCCTAA ATTCTCACAT GAGTCCAGAG TCACCCAAAG CATCTTTGTC CTAAAGGAGC ACCTTTGTAT 000720 000721 CATTTTACAC TCTCTCCTAC ATCTTTTCAG TATATATGGT TATTTTGTAT AATTCAAATT GTTGGCTTAT GAACAACTCT 000800 000801 AAACTGATTA CCGCTTGTTT TTTTCTATAG TCAGGCCCAT TGTTCTCCTA AGCCATGACC CCAGGATAAA CAGTATAACC 000880 000881 TCTTCATGCT GTGGAAGGAA TATACAGTTT CCTAAGATAA TCAGATAG |
Predicted Small Protein
Name | NONHSAT063920_smProtein_533:703 |
Length | 57 |
Molecular weight | 6085.0075 |
Aromaticity | 0.125 |
Instability index | 58.5160714286 |
Isoelectric point | 5.38043212891 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0425593660888 |
Amino acid sequence | MFLSFFSVLCLEIITWANSSMTFILFNTSGGSNIFIGPTPLLNSHMSPESPKASLS |
Secondary structure | LLLLHHHHHHHHHHHHHLLLLEEEEEELLLLLEEEELLLLLLLLLLLLLLLLLLLL |
PRMN | LLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiii |