NONHSAT063966
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063966 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1334 nt |
Genomic location |
chr19-:28206724..28284783 |
Exon number |
4 |
Exons |
28206724..28206766,28223704..28223875,28237006..28237248,28283908..28284783 |
Genome context |
|
Sequence |
000001 GGCAGGAGCG CACCGCGCTG TCTCCCTCCA GGGATCCGCA CCGCCCTACA ATCCTGCTTT GTGCTGAGAT TGTAGTCCTG 000080
000081 CAGGCGTACA ACTAACAAGC TGGGTGCAGA TAAGAGACTA CAGCTCCCCG CATCCCAAGC AAAGGTCCCT CCTCTACGGA 000160 000161 GCCCCTCCAC GCGTCCACTG CGGTTCCGCC GTGCCAAGGG GAGCTTGGCT GTTCACGGGC CTCACCTGCT AGCGAGAAGA 000240 000241 TAGCTTGGCC GGGCGGCTGA TCTCACCTTG TAATTCTGAC ACTGTGTCTC CCGGGCTTGT CGGCTTCATG ACTTGTGCCC 000320 000321 AAAGTTTGAT TTCTCGCAGA CCAGGTAAAA GCCAAGAGGC TCTCATAGGC GCCTTGGCAG AGTTGCCATT GGAACGGGCG 000400 000401 TCCTCTAGTA GCTGGGATCT CCCCGCCCCT TCCTCCTGAG GGGCCACTCC TTTCTGCCCC ACCCTTCTTA TTGCCCCACC 000480 000481 CTTTGCCACA CTCCTTCAGA GATGCGCAGT GCTGCCCCTT TCTATGGGCA GGGCCGAAGG TCCGCGTGTA AAAGTACCCA 000560 000561 GTCCCTGGTA ACCTGACACT TCCCTTTTAA AAGCCACCTT TTGTCTATCT CTGGCCTGCC ACGATTCTTC CTGTGCTCCA 000640 000641 TAGGAGGACC CATTGGACCC CCGGGCTGGC TGCAGGGCCC ACACCTGGGT TAGACCTCGC ACAGGGACGC TGCTGCCACT 000720 000721 GTAATAAAGC GTGCCTACAC GCTTCTGAAA CTGGTGTAGG AACAACCTCA GTTCTGTGAA AGGCGGACGC AGCAGGACAG 000800 000801 AATCTCCGTG GACATCTGTC TGGAGGAGCA ATTTTACTGC GACATTTTAA AGAAACAAAT TTAATTGATT TCCAAGggtg 000880 000881 tccatcgcgc ttccttcact gccttgatca tgtcggggtc accaccTGCG Ggggtttgtc ctgcagaccc tgactcaacg 000960 000961 acggatgaat aatgtacact gacacagatc ttatgcttgt cagtcctgct gagcatccag gccacttaca gactccaaga 001040 001041 agagtcctgt cagccacggc tctgacttgt tggccctccc ggcatttatt tagcacacat ttaatgacag aagtctcagg 001120 001121 ctggaaacac tctttttgta gaacatacaa atggacattt ctaagcacat tgaggcctat aatgaaaaat caaatatccc 001200 001201 acaatgaaaa ctagaaggaa gctatctgtg ataatgcttt gtggtgtatg gattcatctc actgactgaa acctgagttt 001280 001281 tgattcacca ggttggaaac acttttactg tattatctat gaagaaacgt tttt |
Predicted Small Protein
Name | NONHSAT063966_smProtein_971:1213 |
Length | 81 |
Molecular weight | 9342.6431 |
Aromaticity | 0.1 |
Instability index | 47.05375 |
Isoelectric point | 9.23638916016 |
Runs | 15 |
Runs residual | 0.0486842105263 |
Runs probability | 0.0489430607079 |
Amino acid sequence | MYTDTDLMLVSPAEHPGHLQTPRRVLSATALTCWPSRHLFSTHLMTEVSGWKHSFCRTYK WTFLSTLRPIMKNQISHNEN |
Secondary structure | LLLLLLEEEELLLLLLLLLLLHHHHHLLLEEELLLLLLEEELEEEEEELLLLLLEEEEEL LHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |