NONHSAT063999
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT063999 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1295 nt |
Genomic location |
chr19+:28284330..28297155 |
Exon number |
3 |
Exons |
28284330..28284558,28288662..28289084,28296513..28297155 |
Genome context |
|
Sequence |
000001 GAAAGGAGTG GCCCCTCAGG AGGAAGGGGC GGGGAGATCC CAGCTACTAG AGGACGCCCG TTCCAATGGC AACTCTGCCA 000080
000081 AGGCGCCTAT GAGAGCCTCT TGGCTTTTAC CTGGTCTGCG AGAAATCAAA CTTTGGGCAC AAGTCATGAA GCCGACAAGC 000160 000161 CCGGGAGACA CAGTGTCAGA ATTACAAGGT GAGATCAGCC GCCCGGCCAA GCTATCTTCT CGCTAGCAGG AACACTACAA 000240 000241 GGCCTGTTAG AGAAGAAAGG GTAGAATCCC GAGAATGTTT TCCCCACAGT GCTGATAAGG AGAGACCACT ATCCCATCTA 000320 000321 CTGCTACAGC TCTGGAGACA GAGCTCTCCC ACCTGTCATA TAGAACACAA GGACCAATCT GCAGAGAAAG AGCATCCAAA 000400 000401 CCTGATCCAG TGGACACTGG GGAAAAACTC ACCACAGCTG AGTGTGGAAA AACAAGGCCA ACACACACAT CTCTGCACAG 000480 000481 ATACATCTCC CATAAAGAAA CTAAAGTGTT AATTTACAGG GCACTGTTGC AGACCCACTT CAGCTGGAAG CTAGGAACAT 000560 000561 GGACAAGGAG CCTCTCTACC ACCAAGGGAG AGAGAGGAAT GTGCTCTTGT CCTGGCATTG CATCCACAGG AGGGGCAGGA 000640 000641 AATTCTTTGA AGGTCTCGCA TCTGGGGCTC GATCTCGTGC AGAGGAGCAT TTCCGAAGAC ACTGGCCGCT CCCACAATGG 000720 000721 CTCCGAAGAA CCCAGCGACC AGCGGGTTCA TGAGTTTGTT GGGGCTGTCC ACTCGGTACC AGCTGCGCAG GGATGTCAGG 000800 000801 ACAAAGAAAC AAGTTGCCTG GTTCCAGCCC TGCTTCAGCA CGGGGCCTGT GGGGCCCCGG TAAGTCCCGG TGTTCCCGCA 000880 000881 CAATCTCCTA ACCCTGTGGA AGAATCCCCT GTACTTGGAT TTGGAGAGGT CTGGCCATGG ATTAACTTCA CCTTGATGGT 000960 000961 CTCCATGGGA CATAGGACCA CCACGGCCTC GGCCACGCTA GCTCACTGGC CGCACCGCTG CCCGCCTTGC TGTTCACCAG 001040 001041 TCCCTGGGCA TCCCGCATCT GGTTGCTGAG GAACGCCTGA CGCCGCCTTG TGGATGAAGC CGCAGAGCAG GGAGCTGAGG 001120 001121 CTGCGGCCCA GGCCCAGGCT GCCTTGGCTG CGACTGTGTG CCTGCAGGCC CCATGCCCGG TATCCGGTGG ATGCGAGTGC 001200 001201 TAGTCCAGCT GCAGCTGCAT CTTCACGAAC TCGGTGGGGA ACGGGATGCA GATTTTTTTT TTCTTttcct tccttccttc 001280 001281 cttccttcca acttc |
Predicted Small Protein
Name | NONHSAT063999_smProtein_716:862 |
Length | 49 |
Molecular weight | 5383.2408 |
Aromaticity | 0.104166666667 |
Instability index | 48.0166666667 |
Isoelectric point | 11.467956543 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0473414591062 |
Amino acid sequence | MAPKNPATSGFMSLLGLSTRYQLRRDVRTKKQVAWFQPCFSTGPVGPR |
Secondary structure | LLLLLLLLLLHHHHLLLLLLEEEEELLEEELEEEEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |