NONHSAT064003
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT064003 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1329 nt |
Genomic location |
chr19+:28284402..28297690 |
Exon number |
2 |
Exons |
28284402..28284558,28296513..28297690 |
Genome context |
|
Sequence |
000001 CTCTGCCAAG GCGCCTATGA GAGCCTCTTG GCTTTTACCT GGTCTGCGAG AAATCAAACT TTGGGCACAA GTCATGAAGC 000080
000081 CGACAAGCCC GGGAGACACA GTGTCAGAAT TACAAGGTGA GATCAGCCGC CCGGCCAAGC TATCTTCTCG CTAGCAGGTC 000160 000161 TCGCATCTGG GGCTCGATCT CGTGCAGAGG AGCATTTCCG AAGACACTGG CCGCTCCCAC AATGGCTCCG AAGAACCCAG 000240 000241 CGACCAGCGG GTTCATGAGT TTGTTGGGGC TGTCCACTCG GTACCAGCTG CGCAGGGATG TCAGGACAAA GAAACAAGTT 000320 000321 GCCTGGTTCC AGCCCTGCTT CAGCACGGGG CCTGTGGGGC CCCGGTAAGT CCCGGTGTTC CCGCACAATC TCCTAACCCT 000400 000401 GTGGAAGAAT CCCCTGTACT TGGATTTGGA GAGGTCTGGC CATGGATTAA CTTCACCTTG ATGGTCTCCA TGGGACATAG 000480 000481 GACCACCACG GCCTCGGCCA CGCTAGCTCA CTGGCCGCAC CGCTGCCCGC CTTGCTGTTC ACCAGTCCCT GGGCATCCCG 000560 000561 CATCTGGTTG CTGAGGAACG CCTGACGCCG CCTTGTGGAT GAAGCCGCAG AGCAGGGAGC TGAGGCTGCG GCCCAGGCCC 000640 000641 AGGCTGCCTT GGCTGCGACT GTGTGCCTGC AGGCCCCATG CCCGGTATCC GGTGGATGCG AGTGCTAGTC CAGCTGCAGC 000720 000721 TGCATCTTCA CGAACTCGGT GGGGAACGGG ATGCAGATTT TTTTTTTCTT TTCCTTCCTT CCTTCCTTCC TTCCAACTTC 000800 000801 CTTCCTTCCT TCCCCTTTCT TTCTTTCTTT TTTTTTTTTT TTTTTTTTTG ACAGAATTTT GCTCTTGTCC CCCAGGCTGG 000880 000881 AGTGCAGTGG CGCGATCTTG GCTCACTACA ACCTGGATTC AAGCGATTCT CCTGCCTCAG CCTCCCGAGT AGCTGGGATT 000960 000961 ACAGGCATGT GCCACCATTC CCGGCTAATT TTTTTGTCTT TTTAGTAGAG ACGGTGTTTC CCCATGTTGG TCAGGCTGGT 001040 001041 CTCAAACGCC TGACTCAGAT GATCCGCCCG CCTCGGCCAC CCAAAGTGCT GAGATTACAG GCTTGAACCA CCGCGCCTGG 001120 001121 CCCTGTGATG TAGATTTTGA TGCTGCCAGC CAGGCTGCCT GCCGGGATCG CCTGCCCTGG AGCAGGAGCA TCAGCCGTGC 001200 001201 GTTCCAGGAC GCAGGCATGG CATGACCGGC AGGAGGCGGA GTGCCCGGCG TCTCTTGGGA TCGGAGCCTC CTGAATTCCA 001280 001281 CGCTGGGACC TTAATTTGGT TTTAACACAA ATAAAGATCT CACATAAAG |
Predicted Small Protein
Name | NONHSAT064003_smProtein_677:850 |
Length | 58 |
Molecular weight | 6942.1101 |
Aromaticity | 0.298245614035 |
Instability index | 57.0684210526 |
Isoelectric point | 5.97808837891 |
Runs | 5 |
Runs residual | 0.0662280701754 |
Runs probability | 0.0171347818407 |
Amino acid sequence | MPGIRWMRVLVQLQLHLHELGGERDADFFFLFLPSFLPSNFLPSFPFLSFFFFFFFF |
Secondary structure | LLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTToo |