NONHSAT064142
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT064142 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
549 nt |
Genomic location |
chr19+:31910835..31912101 |
Exon number |
2 |
Exons |
31910835..31910869,31911588..31912101 |
Genome context |
|
Sequence |
000001 TCAGTACCAt gtggtaagtc tttattaacc agagtCTAAT TCTGCAGAAT CAATTTGGCT CTGCCAGGAA CCAAGTTTCT 000080
000081 GCTTTAATCT AAGAGGAACT CTGAATTAGT AACCTTGCAC ATGTTGTCTT CCCTTGGAAA TGTCACTAAG GGACTCTTCG 000160 000161 AAGCATGGGT GTGGGTCCTT GGTGTAGGTC CTCTAGGTGC ATGAGGTGGC ACTTTCCAGA AGCATGGGTG AACCTCCCAA 000240 000241 GGGAGTCCAG AGTCTTTTAT TGGAATCAAT GGATGAGAAA AATATTGTTT TGCAACTTGA GTGAATGTGG CCTCCATGAT 000320 000321 CAAAACCTGG ACTAGAAAAG CCTGTGGAGT GGCCCTAGAA CAGGGCAAGG TAGAGAGGAG AGTTTTCTCC TGCTGTGAAT 000400 000401 TTACCACTCA TTCCTGTATT GTAGCCACAT GCTTTAATTT TTTTTCTTCT CCCTTTTCCC ACAGTGCCCC CTAAATATTT 000480 000481 CCACTGAAGA CTTTTAGAAC TTTGGAATAA GGAAATTGTA TCTCCAGCTG ACAATAAAAT TTACGAAGC |
Predicted Small Protein
Name | NONHSAT064142_smProtein_164:334 |
Length | 57 |
Molecular weight | 6887.8949 |
Aromaticity | 0.160714285714 |
Instability index | 74.5126785714 |
Isoelectric point | 8.50677490234 |
Runs | 6 |
Runs residual | 0.0461553473849 |
Runs probability | 0.0302655596773 |
Amino acid sequence | MGVGPWCRSSRCMRWHFPEAWVNLPRESRVFYWNQWMRKILFCNLSECGLHDQNLD |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHLLLLLLEEEEHHHHHHHHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |