NONHSAT064307
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT064307 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1998 nt |
Genomic location |
chr19-:35085572..35166604 |
Exon number |
2 |
Exons |
35085572..35087499,35166535..35166604 |
Genome context |
|
Sequence |
000001 AGCCAGACCA GGAACCCACC AGAAGGAACC AATTCCGGAC ACATAACAAG CAGCAGTGAG GACACCAAAG ACACAGACCC 000080
000081 AGATGCAGAG GCAGAGGCAG CCACACAGCC CCTCCCAGCC ACAATCACAA CCTCATATTC ATATAATCAC AGACCCTCCA 000160 000161 CCCCACATAG TGGGTGGAAT CCTGCCAGCG CATTCCACTC ACACACACAC AAAATCCCAT TCTCACACAC GTGCACCCAA 000240 000241 GCCTCGTCCC GCACACACAA CATGACAGGC CACAGAGCCG GCTGAGAGTC TCAGCACGCA TGGACGCCTG CACTGCGCAG 000320 000321 GTTGCAGCCC AGGCTGCAGG ACCACAGGTG GCAGGGACGA CACAGCAGGT GGCCGGCCAG GGAGTGGCAG TGGCCTCCAT 000400 000401 CCTCCCTGCT CAGCCACAGC CCCTGCTTCA GCGTCTGCCA GTCCAACTGT CAACTCATCC ACTCAACTTT ACAACTGGAA 000480 000481 TGTGGGGGCG TTCAGGGCCC TGCCACTGGT GACGGCCACT CTAAGTCCTA CCCAATGCTG GGTAGGTCCT TTAAGAGGCC 000560 000561 CAAGTCCTGG GCGCTACTAT GAGGTTCTGT ACGTGCACAG TGATGGCTCA TGCCTGGCCG AGGTGAGCCC ACTCAGTCTG 000640 000641 GGTGGCACAG CCTAATCTAG GAACTGCTCT GCGGTTCTAC ATGGCTCTCA GCAGCCCAGT GAGTGTCCTC TGCACCGGGC 000720 000721 GTGTCCCTCA GGTGCTCCTA GCCAGACCCT CCCTTGACAC AGTAGGGCAC AAACCGCTAT TGGAGCGGCA CTGGCACCCG 000800 000801 AGTGTACAAG CGTCAGCATC CCTGCTGCCT TCCCCACCCC CAGCTGTCCC CACCTGCTGA TTCTGCCCCT GGGGTCACAC 000880 000881 TTACAATTTA GGGTCCTGTC AGGAGACAAA AATCACGTGA GTGACATCAG CTCCCTCATA TGTAGGTGCT GGGAAAAGGG 000960 000961 CTTGTGGGGT GCCTGTATAA ACTGGCCATA AAAATACGGG AATAAGTTGT GGAAAGCCAC AAAAGGCCTC TGAGGAGGAA 001040 001041 AGCCTCCTAA TTGCCATCAT GTTCCCATGC TCAGAGCAAG ACCCGCTGTC TTCTCTGTAA ACACTGTGCT CAGGGAGAAA 001120 001121 GACACTTCTT TGAAACACTG GAATGTGGAC AGACGTGCAG GCTCCCAGTC AAGGCCGCTC CTACTAGCTA CTCTCCAACA 001200 001201 AGTTAAAGTT ATGCTGTTTG AGCACAAAGG AGACTCATTT AAACTGCTAT TGCTATAGAT TATGCCTGTG ATGCACTGCC 001280 001281 ACCCTTTCAC TGTTTCTCCC TGAACATCTG CTTCTTAGAT CGAAGGGACT GTACTCAATA AATAGTGTGG AGACCAGAGC 001360 001361 TCGGCACCTT TTGCAGCCTC CACATTTTGC ACTGGCCCCC TGGCTCCCCA CCTTTCACTC TTAACTTGTC TTTTCTCAAT 001440 001441 CCTTTGTCAC CACCAGACTT CGGGTACCCT ACGGGTAGTG TTGAGGCTGG TCCCCAACAT GTAGGATCCC TTCACTGTGT 001520 001521 CACATGTGTC CCTAACACAC TTGCTACATC TCATGTCCTT TAGGTTCTGT GTTTTACTCC AGATAATGTT CTTTGAATCT 001600 001601 AAATTACAGT TTACTGATTT CTCAAAAGCT GCACCTAATG TGCTATCCAT TCAGACAGAC ATACTCACTT AGCAAATGTT 001680 001681 TGTTGAGCCA GCACTCAGTG GCAGATTCTG TGCTAGGGCG TGCCAAGTGC AGACACACGT TTGCCAAGAC ACAGGGTCAC 001760 001761 ATGTGCATGC ACACTCAGAC TTGCAGGCTT ACACCAGTGT TCAGCCTGCT CCCAATCCCA GGGAGCTCCA GGGAGGACAG 001840 001841 AGAGAATGTC ACAACACCCA ACCCCTCCCA CTGCATGCTG AGTCCAGTTC CCGATACGCT GCCACCCCAA CAGCATGGCC 001920 001921 CAGGGCCGAG GGTCTCTCTG CAGACCTGCC CTGACCACAT TCACACACAC ACACACACAC ACACACACAC ACACACAC |
Predicted Small Protein
Name | NONHSAT064307_smProtein_299:511 |
Length | 71 |
Molecular weight | 7219.1856 |
Aromaticity | 0.0428571428571 |
Instability index | 51.6342857143 |
Isoelectric point | 7.88055419922 |
Runs | 11 |
Runs residual | 0.0123055162659 |
Runs probability | 0.0443625443626 |
Amino acid sequence | MDACTAQVAAQAAGPQVAGTTQQVAGQGVAVASILPAQPQPLLQRLPVQLSTHPLNFTTG MWGRSGPCHW |
Secondary structure | LLHHHHHHHHHHLLLLLLLLHHHHHLLLEEEEEELLLLLLLHHHLLLLEELLLLLLLLLL LLLLLLLLLL |
PRMN | - |
PiMo | - |