NONHSAT065867

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT065867

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4343 nt

Genomic location

chr19-:36031641..36036149

Exon number

2

Exons

36031641..36032486,36032653..36036149

Genome context

Sequence
000001 CGGGCAGCCA GATGCTGGAA CGGGAGGCAC ATGTTCCGGC CCCGGCCCCT GGGAAGGAAA GAAAGGACCT TCCCGTTTCA 000080
000081 CTTGTCTCGG CTGAACATGT AGCGGAGGAG GTCGACCACC CGGTGACTGT AGCCATATTC GTTGTCGTAC CTGTGGAGGA 000160
000161 GGGGTCGGGA GGTTCAAGGG GGTTCCTTCC GACCACCCCT TAGTTCCCCT CCCTCTAAGT CTCCAGCTCC TTCCCCCTTA 000240
000241 CCATGAAATG AGCTTCACGA AATTGTCATT GAGCGCAATG CCGGCCTTAG CATCGAAGAT GGACGAGTGG GTATCACCGA 000320
000321 GGAAGTCCGT AGAGACGACC TGGAAGTCAG AATTTCAAAG ATAAGTGTGT CCGGCAGAGC AAGGACCTCC AGGAGCTGAG 000400
000401 GCCCCGACTC TTAACTCTAT CGCCCATCCA TGCATTCATC TATAATATTT GATGTAGCCC TACTGTGTCC AGTCTCTGGA 000480
000481 CTGGAGGGTA TGACCAAGTG CAGGGTATGA CCAAGGCACT GTGTCAGGGT CTGGCCAAAG GGCACAGGTC ACAAACACCC 000560
000561 TCATGCTGTA CCAGTACATC CCTTTCCTAG GAATAATGCA AGCGTTTGGA ATGGGCCAGC ATGGAGGGCC TCTCTGAGGG 000640
000641 GTGGCCATGA GCCTGGGTCT AGATGACTAG AAAGATCTGA CCGGCTGGGG CCCTCAGCAC AGTGTCTGAG GTAGAAGGAG 000720
000721 CTGCAGGAAG GGaggacctg agggttttag ccctagtgtc atgaaaggcc acaggagtgt tttcaatcct gaaaacgggt 000800
000801 gatgcaatgt gattccatta aaacaaaaga tcccagtgac tgtgggaaag tggacctgca ggagttaatg cagggagaca 000880
000881 gcaccaaggt ggatgtacag gggtccaCCA TGACCATGGC ATCCACTCCT CACAGAGAAG GCATCTGGCC ATGGCCTGGC 000960
000961 CCTGAGCAAG TATTGAAAAA AATGGGAGCT GTTGtctttt gttcactaag catgtattag tcacctgctg tatgccaggt 001040
001041 tggagccaca aaagtgaaaa ggcagcccct aaatccctgt tttcttggag tgcacacacc actggggcca acagtgacta 001120
001121 tgaaatgaaa tttcaggtga ggaatatggc cacaaaaaga acatattttg agggggtgcc ttgctgaaga gggaggttcc 001200
001201 tccagagact tggaggaagt aaggacagac tgtatggtca cctggcaagg gaagcattcc agactaaagg aacagcaagt 001280
001281 gcaaaggccc tgaggcaggg agATCTCCCT TCCTGCCCTG CAGTTTCTGA CTTGGCACAT TGAGAGCAGC TCCCTGGCAA 001360
001361 GTGGAAATCA TGTCCCTTCC CAGAGGGCTC CTCCCAGGGT CTCCTCTCCT CAGCCCCTAC CTCATCCTCG GTGTAGGCAA 001440
001441 GGATGCCAGC CATGGGCCCC TTGGCTGCTG CTTTTACAGC CTCCTTGATG GCTGAGTAGG GGGCAGGCTG GGCGAGGCGG 001520
001521 CAGGTCAGGT CCACGACAGA CACATCCGGG GTTGGTACCC GGAACGCCAT CCCTGTCAGC TTCCTGGAGA ATCCCCCATG 001600
001601 AGGAACAGGA GTCAGAACTT AGGGACGTTG CCCTCCATTC CCCCTTTCCC TGTGGCTGGG CCAGGCCCCT GCTTTCCTCT 001680
001681 TAAGGACTGA GGGCCGGGCC AGTCCAGTCC TCCTGGCGTA TGCCCCCACC CTGGTTGCAG CTTCTTGTCC TCATACCCTT 001760
001761 TGAGCTCTGG GATGACTTTG GTCACAGCTT TCGCAGCCCC AGTGGAGGCT GGGATGATGT TCTGGTGGGC ACCCCGCCCA 001840
001841 TCTCGCCAGG CCTTCCTTGA TGGCCCGTCC ACTGTCTTCT GGGTGGCCGT GTAGGAATGG ACTGTGGTCT TGGGGAAGAG 001920
001921 AAGGACCAAG ATGAGGCCTT CATGCTCCTA AGCTCCCATG CCTCTTTTTT CCAGGACTAA GTTGGTGGCC TAGGTGTGGA 002000
002001 GGCTGGTGGG GCCACCACCA CAGACCACAG GAGGGGATGT GTGCAGGCCA GGGTCCAGCC TTGCCTGAGG GTTGCACAGT 002080
002081 GTTTTAAGTG ACTTCTGCAC TGGTGGGCCT CTCCTCCCGA AACCAGTCTC TCCCTCTTAA CTCCATACAG TAAGCAAGGC 002160
002161 CCGGGAAGAA GTTGGGTTTC CCTGCCATCC TTCCTGCCCC AGCCCCTCAT CCTCAACTCA CCATCAACCC TTCCACGATC 002240
002241 CCAAATCGCT CGTGGATGAC TTTGGCGAGG GGAGCCAAAC AGTTGGTGGT GCAGGACGCG TTGCTGAAAC AGCCAAGGTG 002320
002321 TGCACGGACA CTGTGAGGTG AGTCGCAGAG CCACCCCTCC ACCCTTACCC CTCTTGGGGT ATGCACGCAG ACTTGGTTTT 002400
002401 ATGAAACGTC AGGATGAGGG TGAGAGGGAT CTGTGGGGAC ACTGTCAGAC TGAAGGAGGC ACTGAGGTGC AGCTGGGGAG 002480
002481 GCTCCCCAAG CTTGTCCTCT GGAAGTCATG CGTTTTTAGC AGATAGTTTC GGGAAGGAGA AGCAGAAGCC AAGCGACCAG 002560
002561 GAATCCAGTG GGGCTGAGGG TGGGGAGGAC GAGTCTACCC TCCCTTCCAC ACATTGCAGG ATGTCACTGC CCACATTACC 002640
002641 TCACAATGTT CATGGAGCCA GGGTTATAGT CATTTTCATT GACACCCATG ACGAACATTG GTGCATCCGG TGAGGGCGCG 002720
002721 GAGATGACCA CACGTTGAGC ACCTGCAGAG ATGTGGTCCT GGGGAGGAAG CGCAGGTGTC AGGGGCTTCT GGCACCATCA 002800
002801 TCCCCCCAGC TAGCCCTGGG CACCTCTCCC CAGCTTACCG AAGCTGCCTG TATGGAGAGG TACACGCCTG TGGACTCCAC 002880
002881 CACGTAGGGG CTCCCGACAG CCCTCCAGGG GATCTGTTTG GGCTCTTTGC TGTGGGGAAG TGGCAGGGCT GAGTCAGTCT 002960
002961 CCCCTGCTTG AGCCCCACCT TCATAGTCCA TGGCTTTCAC CATTTGACAG GCTGAGCAGG TACCGGCCCA CCTGCAACCA 003040
003041 CCTGCGTCCC CTACCCCACA CACCTACTTG TTCCAGATGG GCTCCACCCC GCTGGCCTAG CTTTTCACCA CTGCCCCACT 003120
003121 TCAGACCACT TTCCCTTTGC TGATTGCACC ACCCCTGTTA TGCCTGGGTA CAGGTGGTGA CCTCCCCAAC TCAGCCCTCA 003200
003201 ACCTCCTCAG AGGCGCCAAT GCTGACTGCT GTCAGCCAGC CCAGACCCTT TCTCCATATG CTGCCCGGGA CGTGGACTCT 003280
003281 GTGACTGTGA GGCCTGCCCG GCTGCTTTCT GCTTCCCAGC TCTGACAACC TCGCCATGAA CCCTCCTAGA CCCTCAGCTC 003360
003361 CTGCAATAGG AAGCTGGCTG CCAAAGGCCA GGAGGGTCCC TGAAAACAGA CACTGCATTA AAGAAAAAGC TCCTGGAGGA 003440
003441 CTCCTGAAGC CTGAGGCAGC CTTGGGGCAG CAGTGGCTCA TGGTTTACAT TGGAAAGGTT TATCATGAGT AACCGGGTGC 003520
003521 TTTGCTTCTG TGATTCTTGG CCAGTGTCGG TCTGTTTCCT TTGCCATTGA GCCTGCTCCC CTCAATGGGG GGTTCAATCA 003600
003601 ATGTTTGTGG GGtttgtttg ttttgagaca gggtcttcct ctgtcgccca ggctggagtg cagtggtgca atcagagctc 003680
003681 actgcagcct tgatcttcct ggctccggcc atcctcctgc cttggcctcc cgagtagctg ggactacagg cgcacaccac 003760
003761 catgccaagc taatttttaa atttttttgt agagatgggg tctcactttt gttgcccagg gtgctttaga acccctgggc 003840
003841 tcaagtgatc cttgacctcc cacagtgctg ggattacagg tgtgagccac cgtgcctggc cTCATGGGtt ttctttgttt 003920
003921 tgttttgttt tgtttttgag acagagtctc actctgtcac tcaggctgga gtgcagtggc acgattttgg ctcactgcaa 004000
004001 cctccacctt ccgggttcaa gcgattctcc tgcctccgcc tcccgagtag ttggggttac aggcatgcgc taccacacct 004080
004081 ggctagtttt ttattgttgt tgttttttgt atttttagtg gtgacggggt ttgctctgtt ggccaggctg gtctcaaact 004160
004161 cctgacctca ggtgatcccc acttcagcct cccaaagtgc tgggatgaca ggcatgagcc tctgcacctg gccTCGTGTT 004240
004241 TTTTTTTTAG TTAGCCATTT TATACGTGtt tactgaacac ctgtcctgtg cccatattct aagtgcctta cctgcattaa 004320
004321 actcatgtaa ccttcacaac ccg
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Predicted Small Protein

Name NONHSAT065867_smProtein_11:202
Length 64
Molecular weight 6639.4607
Aromaticity 0.031746031746
Instability index 49.4047619048
Isoelectric point 4.93194580078
Runs 9
Runs residual 0.00210560414642
Runs probability 0.0347995053878
Amino acid sequence MLEREAHVPAPAPGKERKDLPVSLVSAEHVAEEVDHPVTVAIFVVVPVEEGSGGSRGFLP
TTP
Secondary structure LLEEEELLLLLLLLLLLLLLLEEEELHHHHHHLLLLLEEEEEEEEEELLLLLLLLLLLLL
LLL
PRMN -
PiMo -