NONHSAT065942

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT065942

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2036 nt

Genomic location

chr19+:36440386..36442421

Exon number

1

Exons

36440386..36442421

Genome context

Sequence
000001 TATGGAAGCA GGAAGGATGG GAGGAGGGCA GACTGGTCCC TCTAGCATGG GTCCCCCATG TTCCCCCACA GCATGCCTGG 000080
000081 ACCACCCCCA CCCGCCTGCA GAAACACACA ATCACATGTG TCTAGGATTT AAAGTTAAAA TTTTGCTTGT CAgctaggca 000160
000161 cagtggctca tgcctgtaat cccagtgctt tgagaggcca ccctcaggga ggattgcttg agcccaggag ttcaagacca 000240
000241 gcctgTTTTC AACTCCGTGG ACCCTGTGAG GCACACTTCA CTCTCCCCAG CCCTCTGGAT AAAACAGTAG TTCCTTAGGA 000320
000321 ACTTTAACTT CCCCCAAAAT GCTGTGGCCT CCCAGGCAAC ATAGCCATAC CCCATCTCTA CAAATAATAA TAATAATTAG 000400
000401 CTTGTCCAAC TGCCTAGCTA AGTCCATCAA TTTCCTGAGC TCAGGGAGTA CAACTACTTC TACTGTCAAT TCCTCATCAA 000480
000481 TTCCTCATCT GCTTTTGGCC CCACACATTT TTTAGACCAA AGCTCCGGCT GCTGGAGCAT TATCTTGAAG TGACTGTAGA 000560
000561 CCCAATACCA GGATTCTGCC CTGTCTGTGT ACTGCCAGAT CCAACCCATG TGTCTTGGGG TGGCTAAATC TGACAAAGGC 000640
000641 CCTGAGTGTC TGGGGACACC TGTGATCTCC TGCAAGGCTG AGGCTAATGC CACGCTTTTG CAGCTCTTTG CATGGGCACA 000720
000721 TATGTGAGAG AATCAGATAA AAGGTGTTCC CAAAAAGGAT GTTTGTGTTC AGGGTGGAAC CTGACGCCTG CCTCCTGCCT 000800
000801 TTGGGTCCTC CCTGATGGCT GTGCCCTCTC ATACCTCGCA AAAGCAAAGA TAGGTATCAG TGCTGCCTGT CGTCCTGAcc 000880
000881 tgtgcggagt gacgttggga acattgtggt gaccaacaca gccctagccc ttgccctcag agttccagtt caaggctggg 000960
000961 agcagtggct catgcctgta atcccaacac tttgggaggc cgaggcaggt gggtcacttg aggtcaggag ttcgcaacca 001040
001041 gcctggccga catggtgaaa ccccaactct actaaaaata caaaaattat ccgggtgtga tggcaggcac ctataatccc 001120
001121 agctacctgg gaggctgagg caggagaatc acttgaaccc gggaggcaga ggttgcagtg agccaagatt gggccactgt 001200
001201 agtctagcct gggcaacaga gcgagactcc gtcccaaaac aaaccaacaa aaaagagttc tatttccagt ggaggaaata 001280
001281 gataatcaca aaacaatggc atcccagagt ggtcgggGAT GGGGAAAGAA CAGGCAAGAA TGATCAGGGC TTTTGCAGAA 001360
001361 GCCCAGGGGA CTCCCAGAGC CAGAGGGTTG tacacttgat cttagccaaa aggccaagaa gcaatCTGAA GTTTCTAACT 001440
001441 GGGCCTGGGA TGGGAGGTGG GGAGACAGTC CAAGATTTCC TGAGGcaggg ccagctttat ggcagtgtga ctgtggggtt 001520
001521 gcaccatgcc ccaaacttag aagtacccta tgcttgcttt aatgccctag tgtcactatc ttgaaattaa taatttttga 001600
001601 acaagggccc cacattttga ttttgcactg cgccctgcaa attatgtagc cagtcctgCC CGGAGGAGCG AACACTTGAG 001680
001681 GGATTTACAG AGAGAGCCGA GGCAGAGAGG GTCTTCCCAG GAGAGAGAGC ATTGGGTACA AAAGCCAAGA GAGggccagg 001760
001761 cgcagtggct catgcctgta atcccagcac tttgggaggc tgaagcgggc gaatcacctg aggtcaggag ttcaaaacca 001840
001841 gcctggcaaa catggcgaaa acccgtctct actaaaaata caaagaatta cctggacgtg gtgtcaggaa cctgtaatcc 001920
001921 cagctacttg ggaggctgag gcaggagaat cgcttgaact tggaaggcag aggttgcagt gagcccagat cctgccaccg 002000
002001 cacactagcc tgggtgacag agtgagattc cgtctc
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Predicted Small Protein

Name NONHSAT065942_smProtein_338:514
Length 59
Molecular weight 6309.2759
Aromaticity 0.051724137931
Instability index 47.4879310345
Isoelectric point 9.50140380859
Runs 9
Runs residual 0.0014209928003
Runs probability 0.0869398810576
Amino acid sequence MLWPPRQHSHTPSLQIIIIISLSNCLAKSINFLSSGSTTTSTVNSSSIPHLLLAPHIF
Secondary structure LLLLLLLLLLLLLLEEEEEEELLHHHHHHHHHHLLLLLEEEEELLLLLLLHHHLLLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
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