NONHSAT065951
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT065951 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1542 nt |
Genomic location |
chr19+:36505411..36536875 |
Exon number |
10 |
Exons |
36505411..36505488,36510136..36510208,36515298..36515534,36517049..36517167,36517488..36517649,36517854..36517947,36518034..36518173,36523094..36523317,36523626..36523775,36536611..36536875 |
Genome context |
|
Sequence |
000001 ACAGCCGCGG GAAGACATGA GAGGCTGCTA GAAGGACTTC CCGCGGCCAG CGCCATCACC TGCCCACGCC GCAGGGAGGT 000080
000081 TCGTCCAGCT CCACGCCCAC CCACTGGCCG CTGGCAAACT CCGTGGTCCC ACAGAACCGC AGTGTGCCCG TCTTCTGGCC 000160 000161 ATCCAGCAGC ACGCGGTCTC CCAGGCGCAA GCCCAGTGCG CTAAGCATGA GATTGCCTGG GACGTTGTCA TAGTTGGGTA 000240 000241 GCGTGACCTT GGGGAGGGCG CAAGATAGTG GCACTGCCTC TTCCAGAAGC GTCCGCAGCT CCTTGGCCAC CAGTGCCGCC 000320 000321 TCTGCCTTGT CCAGGGACAT GTCCATAGGA TCTGGGACCA CCTCCGCCGG CACCTGTCCT TTTCGATTCC TCAGCGCAGG 000400 000401 GTTGGCGCCG TGCTCCAGCA AACATTTGGC GGCGCCCAGG CACAGGCTGG AAGCAGCGAT GTGCAGGGCT GAGCCGTGGT 000480 000481 TGAAGTCACT GCACGTGGAG TTCACCACTC GCGGCCTCGC ACCCTTCAGC AGCACACGCA CGAGGTCGGG CACATCAAAA 000560 000561 TAGGCCGCGT AGTGAAGCGC GTTCATGTTG GTCCAGCGGC TGCGCAGCGT CACATCTGCG CCCAGCGCCA GCAGCTGCTG 000640 000641 CGAGAGGCGC ACGGCTGCCG CGGGGTCCCC GACTCCGTGG GCCCCAGCTT TGCACGCATA GTGGAGCAGT GTCATGTCGG 000720 000721 TCAGCCCGTC ACGATCGTTC ACATGGCAGC CTCGGCGCAG AATCTCATTG CCGATGACGT CTATCTTGTG CTGGACTTGG 000800 000801 GGCACCCACT GGCGCACAAT GGCAAACAGC TCGGGGATGG TGGTCTGAGG GTCAAACAGG ATCTCCTGGC ACGCCGGGTC 000880 000881 ATTGGGATCG AAGAAGGTGA AAGCGTAGTC CTTAGGGAGG GGGGCAGGTG CCGAGGGGTG CACAACAGGC TTCTGCCGGC 000960 000961 GCTCCTGGGT GGGGCTGGGG GCCTCGGGGA CGGGTTCAtc ctcctcctcc tcttcttcct cctctcctcG GGGTGGCGGG 001040 001041 GCCATCGGGG CAGGATCTGT CTTAGTCATG GTCCTCGGTG GCCCTCGGGG GGCGGGTGCA GAGTTGGGGG CAGCCTTCAG 001120 001121 GCAAATCCTC GGGCAGACAG CGCTGGGGAC CAAAGTGGAG ACTGGGGAGA CTGTGGGAGC AATGGGGTGT CGGTGTCAGG 001200 001201 GGACGTGATG GGGGAGGCAA GGGAGACAGA GAGAAGGGGA CGAGGCCCAG ACGCCGACAG GGGGTGGGGG CGGAGAGaaa 001280 001281 agaagagagg gcaatgcaac catggaggca gagactggag agatgtggcc acaagccaag cactgcctgc agccaccagg 001360 001361 aaccggaaca ggcaaagaag agattctccc ccagaacctc cagaggagta cagccctgcc gacaccttgg ttttggccca 001440 001441 ggaaagccga tttggactcc tggcctctag aactgttaga aaataatttg tcttgtttta agccaccaag tttgttagag 001520 001521 cagcatggga aactaataGT GT |
Predicted Small Protein
Name | NONHSAT065951_smProtein_338:562 |
Length | 75 |
Molecular weight | 7879.976 |
Aromaticity | 0.0675675675676 |
Instability index | 41.2716216216 |
Isoelectric point | 10.8229370117 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0307268052367 |
Amino acid sequence | MSIGSGTTSAGTCPFRFLSAGLAPCSSKHLAAPRHRLEAAMCRAEPWLKSLHVEFTTRGL APFSSTRTRSGTSK |
Secondary structure | LLLLLLLLLLLLLLHHHHLLLLLLLLLLLLLLLHHHHHHHHHHLLLHHHHLEEEEELLLL LLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |