NONHSAT065983
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT065983 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
981 nt |
Genomic location |
chr19-:36803622..36807236 |
Exon number |
2 |
Exons |
36803622..36804224,36806859..36807236 |
Genome context |
|
Sequence |
000001 TGGTGCTAAA TTAGAtcata gtgtggtcct tggaccaaca gtatcaatag cacctgaaaa tcatgctgga aatacagatt 000080
000081 cacaggctgc tccctagaat actgaagaag aaactctagg agtgagaccc aacaatctgt atttaacaag tccccaggtg 000160 000161 agtctgatgc acacagaaat gtgagCTGCT GTATTAGATG GTGTTGAGTT CATGCCACCG AATCACTGAC ACACACGTCT 000240 000241 GCTCACTGCT TGCTCTTTGC ACAGGCCCCT GGATCCTCCT GGAATCCCCG ATCCCTCTTG CTCCCTGGCA GAGTTTTCTA 000320 000321 GTCCCTCTTA CTTGAAGCAT GTCTTTCAGA GCCCGGCACC ACCCATCTTG AGTATCTGAT ACCCCATCAG CCTGAGTCTC 000400 000401 TTAAAGGCCT TTATACACAT ATGTCTACAC ATAGGGATTT GGATGATCTC GGGATCCCAC ATCCTCGCTG TCCCCTGTCC 000480 000481 CCCCGCAACA TCCCCCACCA ATACCTTTCT GAAGTTTTCT AGTCCCTCCT TTTTGTTTGT GCTCCTTAAA GCCCAGCCCC 000560 000561 ATGCCTGACT TTGGTTCCCA GTGAGCATTG TACATTTGTG GATATTAAAT CTTTGGCAAA GTCATTTACC TGGGCTGGAA 000640 000641 TAGGGCTCTT GGCTGATTCT TTTTCCTAAA CACCCACCCA ATGGGAGAGG CTGATACTCA ACATGCAAAC CTTGTGTTTT 000720 000721 ATTTCTCCAG GCGAAGGGAT GTTGGAAGAC ATTCTGGAAG GGGTGGGGTG TGAAGATTTA CAAATAATCT TTGAATATCT 000800 000801 GCTTCATGAT AGGTCTTGGA GGTGCCTTGT GGGTGTGGCT TTGGGGGGAT GGTTACGAGG AAATTGTGGA TATTAAGGAA 000880 000881 GTCAGGAAAG GAAAAGATCA GTCACAATTC AACAATTCAG AGAAAGCTCC TAAGGGACTT TCTGGCTGCT TGATGCCCAG 000960 000961 AGGCCAGGCC CTCACTTCGT A |
Predicted Small Protein
Name | NONHSAT065983_smProtein_197:334 |
Length | 46 |
Molecular weight | 4960.8979 |
Aromaticity | 0.0666666666667 |
Instability index | 65.2933333333 |
Isoelectric point | 5.94793701172 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0465843995256 |
Amino acid sequence | MVLSSCHRITDTHVCSLLALCTGPWILLESPIPLAPWQSFLVPLT |
Secondary structure | LLLLLLLLLLLLHHHHHHHHLLLLEEEEELLLLLLLLLLEELLLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooo |