NONHSAT066079

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT066079

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3990 nt

Genomic location

chr19+:37742800..37750921

Exon number

3

Exons

37742800..37743084,37746801..37747716,37748133..37750921

Genome context

Sequence
000001 ACGCTGGGTC TGCAGATGCC ATCCAGGCGC ACGGCGGGTA TAGTGGTTCC GCAACCTTGG GATGTTCGGC TGAGCGCCTG 000080
000081 CCTAACATGG GAGCGCCTGC CTAACCCTCC TGACTGGAGG GTCAGCGGCG GGGAGTCCTG GCCTTCAATC GGCCATCGCC 000160
000161 ACGGCAGAAA CTGGGGCCCG GGCTGCGTCC AGGCCCTTCC CCGTCCGTCC ACAGGTCTCA TGGGCGCCCG GACTGGGGCT 000240
000241 GATGTAGTTT CCCGACCTCT GACACATAGG ATCTGGAGAT TAAAGCTGCT CTGCTAATAA TTAGGTTCCC ACCTCTCAAG 000320
000321 ATCATTAGGA GCTTCTTTTC CAATTCCTCT GTTTTGCATG CATTGGAAGG TAAGTTTCCT TGTAAACCAG ATTTTGGACT 000400
000401 CTGCAGGCTT TGCCAAATGG CCTTTTTACC CTCATGTATA TTGCATTTTC TTTGGATAGT CTCATGGATT CTCAAGGATA 000480
000481 TTGTATTCCT GTATTTTACC ATTCATGAGT TTAGAAGTGT GTTTACTTTC CTGAGTTTTC ATTTTCTTTT TCTTCTGTCA 000560
000561 TATGTAATTT ACAGAGCAAA TACCTACCAG AATGGATAAC TTGAGAGATG TGGAAAGTGA GTTTCTTTGC GCTTATCTAG 000640
000641 TGAGGGTGAT TTTTAGTCAA TAAGCATTTG GTATATgcct gggaatccaa cagctgctat ttagattcag agccagcctt 000720
000721 tatttatcag ctttctgatg ctgaacccat cagtgaactt ctctgtatat ttgattcatc ataaggaaaa tggtgaCGCC 000800
000801 GAGGGTGACT GATTTCCAGG TTTACATCGG TTGCCCCAGG GGAAGTGCCT GGCCCCCATC TGGTCCTTGC TGCTCTAACT 000880
000881 TTGCCCTGTT AATTGAAGAA ATGCAGGTAT AAACACTTCC TGGGTTGTTG CTGGCATTTA TTGTCCTCAC AGTTTACAGA 000960
000961 GAAGCCCATA TTTTCAGCCT CTTCCTCTGC TTTCTGTCAT TTCTGAACCA TCTCACCCGA CCTGGTGTAA TTTTCATTGT 001040
001041 GTGTGAGTTT GCACAGATGT AATTTGGGCC TACATGTGTC CAAAGCCTAA TGCCCACCTC CCACCTCCAC TAGGATCTGG 001120
001121 AGCTCAGGAC CCACTACCTC CCCGGCCCAC TGCAAGCTTG AACATTTGAT GGTGGACACC CCTCCCTGAC TTTGTATTAT 001200
001201 GTGTCACTGG TGTGGGGGTT ACCTTCCCAC TATGTCTCCC AGAAGACATG AGGGCACAGA CTACAGTGCC TGTGGACAGA 001280
001281 GGAGCTGTGG GGATGGAAGT GTGATTGCTT CATTCAAATG CACGCCCCGG TGCGTGTGCG TCTCTTCTGA TGCAGCTCCC 001360
001361 CATGGGTAAG CTCTGTGCTT CTCCACACAG TGGATCAGGA GTGGAAACAT TCTGTCTGTT TAGCACTTGA CGGTTTGGTG 001440
001441 GTGACCTGAT GTCATGGTGA TAATAGAGGC AATGATCCTA ACAGCTTAGA ACTGTTCAGC TTggccgggc ctggtggctc 001520
001521 acacctgtaa tcccagcact ttgggagact gaggtggggg tatcacctga ggtcaggagt ttgagaccag gctggccaac 001600
001601 atggcgaaac cccgtctcta ctaaaaatac aaaaattagc cgggtatggt ggcacacgcc tgtaatccca gctacttggg 001680
001681 aggctgaggc aggagaatcg cttgaacccg gaaggtggag gcttcagtga gctgagatct tgccattgca ctccagcctg 001760
001761 ggtgacggag cgagactctg tctcaaaaaa aaaaaaaaaT TGTTCAGCTT GTGGGTAGGT ATTTGGGAAA CATTATATGT 001840
001841 ATTACCTAGT CTTAGTTATC TGCAGTGGTT TTGTTATTTT TTGCATAAAC TGCTGAGAAT GTTTAATAAT TGTAGATGAT 001920
001921 AGATCACTAG TCACTCTAAA ATCTTCCCAT TTCTTGGTCT AGAGCTGGGG CTGGATCCCT CAGCAACGAG GAGACCTGAA 002000
002001 AACTAGAGGA AAAAAAGCAG GTCCTCCCTA TAAACCACTC ATCTGTGCTC TCTTCCAATT TATTCTCCTT TTGTGTACAT 002080
002081 CATTTTAAGG GGCTATAATC ATCTTGTTCA GACCTCAGGA TATAAAATGA CCCATCTGTA GACCTCCAGC CGTATCCCAA 002160
002161 AGTTGTCTGT TTTGTTTTTT TTTGAAATTC CTGACAAGTT TCAGTTGTAG CTGTGCCCTG AGGAAACATT CCCGATTCCC 002240
002241 GGAGTAGCTT CCAGGTTAAA GTCCTGTAGG CTTCTTCTGT TTTTAGAAAT TCCTATCAGA GAAAGACCTG ATTTTGGATT 002320
002321 TTTAGCTTTA ATGCTTGTGA AAAGCTATAA AAATAATTTT CTACGCCTAG CTTTGAAGTA CTGTTAGTGA GAAATTAAAA 002400
002401 TTCCTTCAGG AGGATTAAAC TGCCATTTCT GTTACCCTAa ttacaaaagt tttggttgtt agaattttct ttactgttca 002480
002481 tgaagaagta ttttatattt tccttcgaca ttcattctct ttagcaggta attttgaact ttagtttctt aaatacccaa 002560
002561 atttggtttt tcctcagtct tctctctgct acagatttct aacttaaCAG GAAAGGCAGT TTTCCTCAAA AAGGGCAAAG 002640
002641 AACAGCGGGA ACAGTAGAGG GCACCTTCAA CCCCAGCATG GAATTGACGT TCCTGCTTCA AAATGAACCA TCACAGCAAT 002720
002721 CTTGGCTTTT TGATTTGGAC CCTCATTTCT CTTATAATTT GAACTTATAT TGGAGAGAAG GGGCCTGTCT CTTAAGCCAG 002800
002801 CTAGTTTTTG TACTGGATAT TTATATATCA TTTCATTTGT TCCTTAGTGT TTTTTCATTT CTATTATGAT TTGTTCTGTG 002880
002881 GGATGTGACT TACCGGTGTG TTTTTCACGT TTATAAAGCT GAATACTTCT GTATGTCAGC TTAGCACCCC TAGCATCAGC 002960
002961 CATGCTACTC TCCTGCTGTG CATAGATGGG GGCCTGTCCC CCTGCTGAAT CTCCTGGGTT CCTGCTGTCA ACACCTGAAG 003040
003041 GTACCCACCA GATGTGTCTG TCACTTCCCT CCATCCACCT CTCTTGTGTT TCTCATGTTT CTGCCTCCCT AGAGACCATT 003120
003121 TCTCTCTAGA Gcagtgcttt ccaatagaaa tacaatgcca gacacatacg tcattttaga ttttctagta gtcactttag 003200
003201 aaaagttaaa aagaggctgg gcatggtagc tcacacctgt aatcccagca ctttgggagg ctgaggtggg cagattagct 003280
003281 gaggtcagga gttcgagacc agcctggcca acatggtgaa accccgtcac tactaaaaat acaaaaatta gccgggtatg 003360
003361 gtagcaggtg cctgggatta cagcctcccg agtaggctga gacatgagaa tcacttgatt ctgggaggtg gaggctgcag 003440
003441 tgagccgagg tcatgtgcac cactgcaatc caaccttggc aacagagcaa gactttgtct cacacaaaaa aaagaaaaga 003520
003521 aagaaaagtt aaaagggagc aggtgaaatt aataatgtgt tttatttcac ctaaaatgtt agtattatcc agaatatcac 003600
003601 ttcaacgtct tatcaaaata aaaattatta atgagatagt ttgcattctt cctctttttt gagatgggct cttgcttttt 003680
003681 ttttggccca ggctggaatg cagtggcacc agcatagctc actgcagcct caaactcctg ggctcgagat cctcctgcct 003760
003761 cagccttcct agtagttagg actacaggca cacaccacca tgcccagcta attgtttttc ttttttgttt gtttgttttt 003840
003841 cttttttttc ttttttcttt tttttttttt tttgagagga aatctcactc tgtcacccag ggtggagtgc aatggcatga 003920
003921 tctcagctca ttgcaacctc cgcctcccag gtttaagtga ttttcctgtc tcagcctccc aagtagctgg
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Predicted Small Protein

Name NONHSAT066079_smProtein_3452:3661
Length 70
Molecular weight 8179.0573
Aromaticity 0.0434782608696
Instability index 53.7028985507
Isoelectric point 10.5746459961
Runs 9
Runs residual 0.0088965418281
Runs probability 0.0221790417869
Amino acid sequence MCTTAIQPWQQSKTLSHTKKRKERKVKREQVKLIMCFISPKMLVLSRISLQRLIKIKIIN
EIVCILPLF
Secondary structure LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLEEEEEELLLEEEELLLLHHHHHHHHHHH
HHHHHLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHH
HHLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTT
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