NONHSAT066100
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066100 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
958 nt |
Genomic location |
chr19+:37808802..37820007 |
Exon number |
5 |
Exons |
37808802..37809088,37813087..37813134,37814435..37814472,37815110..37815167,37819481..37820007 |
Genome context |
|
Sequence |
000001 CGGCACAGGC TGGGTCTGCA GATGGCGTCC GAGTGCACAG TGGCCAGTGT GATTCCGCAG TCTTGGGCTG TTCGGCCAAG 000080
000081 CGCCCACCGG ACGTGGGACG CTGGAGGGTC AGCAGCGTGG AGTCCTGGCC TTCAGCGTCC GCGGCTGGGA AATCGGCCAT 000160 000161 CGCCACGGCG GGAACTAGGA CTGGCTGCGT CCCGGCCCTT CCCCATCCGT CCACCGGACT CGTGGGCGCC CGCACTGACT 000240 000241 GTGATGTAGT TTCCTGACCT CTGACACGTA TTGTCTCAAG ATTAAAGGAA TCAGGAGCTT CTTTTGCTGT TCTTCTGTTT 000320 000321 TGGATGCATT GGAAGGTCCA GATTTGGAAC AAGTCTCTCT AGAGATTGAA CAGAGCTGCG CCTGGAACCC GCCGCAGGGA 000400 000401 GGAGACCTGA AGACCAGAGG AAACACAGCA Acataggaca acacagcgag accttcacca gatgcaggcc cctcactttc 000480 000481 ccagtgttca gaaccataaa ccaagtgaac ccttataaat cacccagtct gtggtattct gttatagcaa cacaaacaga 000560 000561 ctaagacaGG GACACTCAGT GAGCTCTTCT CTCTACTTGA TGGAGCACTC CCTGCGTGGT GCCTTGTATT TGTAGACATG 000640 000641 ATGCTGTAAA TGCTCTTTGA GTGTCTCGAA GGCTTTTATG TTTGAGGAGT TTACAGAGAA GCCCGTACAG GGTTCAGGTC 000720 000721 CATTCTGTTG CTTCTTTGCT CCTTAGTTCC TCCCCTAATC TGATGTTAAA TTAGAtcata gtgtggtcct tggaccaata 000800 000801 gtatcagtag cacctgaaaa tcatgctgga aatacagatt cacaggctgc tccccagaat actgaagaag aaactctagg 000880 000881 agtgagaccc aacaatctgt gtttaacaag tccccaggtg agtctgatgc acAAAGAAAC GTGAGCTGCT GTATTAGA |
Predicted Small Protein
Name | NONHSAT066100_smProtein_677:745 |
Length | 23 |
Molecular weight | 2498.8479 |
Aromaticity | 0.227272727273 |
Instability index | 55.9545454545 |
Isoelectric point | 4.25201416016 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0352587882001 |
Amino acid sequence | MFEEFTEKPVQGSGPFCCFFAP |
Secondary structure | LLHHHLLLLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |