NONHSAT066197

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT066197

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3807 nt

Genomic location

chr19+:38779046..38783108

Exon number

2

Exons

38779046..38780920,38781177..38783108

Genome context

Sequence
000001 CAAGATGTGT GTTAGCTTGC TTTGTAGTGC TGGCGGCTGC TGCCCCATTC CTCCTTTATG GTTTAAGGAC TCTGCATCGG 000080
000081 GCGCCTGGGG TGAGTGGTCC CGATGCACTA CCAGGTAGCA AATGCACCCT CGGGGCAGAC CTCAGGCCAT GGACTCTGGG 000160
000161 AGGCTGCTGT GGAGGGGGTA CTGCACCGCA CCCCTGCTGG AGGATGGGAC TCCCCCGGCA GCTGCTACCC ACCGAGTGCA 000240
000241 CTGTAGCTCA GCAGCTGTTG GGCCGGCTGG CTTGCAGAGT GCTGGGGCGT TAGGGTGGTC ACTTTCCAGC TTTGCTAGGC 000320
000321 CTGGAGTCCT GTGCCTGTCC TGGCTTTGCT CTGCCTGGCT CCCTGTTTAT CCTCTGCTAG CCCCCCCACA CACCAGCTCT 000400
000401 GGTTTCCATC TTGTTGGAGA GGAACATGTC CCCCTCACTG TATTAGAAAG TGTGAACAAG ACCGTGTTCC CTATAATATT 000480
000481 AGGAGCTGTG GCAGGCTTGG TTTCTATAGG AACCCTGAGG TGGCGGCAGG GCCACCACAT CCAGCACTCT CAGTGTGTGC 000560
000561 GTAGAGCCCA TTAGGGCTGG GGTGACGTGG CAGAGCCGGC CATGGAAGGG GCTACACACC CCTTCTTAAA GGCGTGTCCA 000640
000641 CACTCCTCAG TGGGCCCTTC CAGACCCAGA CCCAGCTAGG CCTGTGTCCT GTGTCCGGCC CAGCCTCCCT AACACAGATG 000720
000721 TTTGTGTTTC AGCTCCCAGA AGGCAGGATT CTGAAGACCA CTCCAGCGAT ATGTTCAACT ATGAAGGTAA AACTCCAAAG 000800
000801 Aggccaggtg cggtggctca cacctgtaat cccagcgctt tgggaggctg aggtgggcgg atcacgaggt caggatatca 000880
000881 agaccatcct aacatggtga aaccctgtct ctactaaaaa tacgaaaaat tagctggacg tagtggcatg cacctgtagt 000960
000961 cccagctact caggagactg aggcaggaga attgctcaaa gcctgggagg cggagggtgc aatgagccaa gattgcgcca 001040
001041 ctgcactcca gcctgggcaa cagagtgaga ctctgtctca aaaaaaaaaa aaaaaaaaaa aaaaaaaaCT CCGAAGAAAC 001120
001121 TTATATATGG GGCAAAACAT GTATTCTTAG TTGGGTATTG AGAGACACTT GCGGATTTTC ACTGAGGAAG TTGTAGAGCA 001200
001201 GGGCTCTCCC CTCCCCAGGT GGTGGCAGCC CCCTGAGGTT GGGGTCAAGG TGACAGGCCC CACGTGGATG CCGCCAGCAG 001280
001281 TGGGAAGGAG GCTGCGCCTG TGGAGATGTG CGTTAGAGGC GTAGCCTGGC ACGTGGCTCT GCAATTTACA TTGTCCCTGA 001360
001361 Acctctcgcc agcggcttgg ctgtgggcaa gtgactgttg ccccgcctca gagttcccat gtataaaatg aagggtccca 001440
001441 gataggtctc atagagactc agccactgca tgtaaaaggc ctagaacagg gcttggcaga gagcagcctt caaAGCTCCG 001520
001521 AAGCCGTCAC CTGGACCCAA GGAGCAGCGC GTCAGAGCCG CTGCACTGGT CTTGGGTGTA ATTTACAGGC TTCTTTACCA 001600
001601 GAGAGATGTT TCTCCGTCTG CTGGAGCCGC AAGCCTCCTC AGGCACTTTC TGGCTTGCTT CCCCTCCTTG CGGGCCCTAC 001680
001681 TAATTTGTAT TCCCTGGGCT GTCTTACTCC TAGAATACTG CACCGCCAAC GCAGTCACTG GGCCTTGCCG TGCATCCTTC 001760
001761 CCACGCTGGT ACTTTGACGT GGAGAGGAAC TCCTGCAATA ACTTCATCTA TGGAGGCTGC CGGGGCAATA AGAACAGCTA 001840
001841 CCGCTCTGAG GAGGCCTGCA TGCTCCGCTG CTTCCGCCAG CAGGAGAATC CTCCCCTGCC CCTTGGCTCA AAGGGTAAGT 001920
001921 GGCCCCTTAC CCTCCTCCTG CCATCAGCCT GCCTCCTCCC TTCCTTGACT GAGCTCAGCC CTGCCCAGCT GTGGTTTACA 002000
002001 TTATCCTTCA CTGTGAACAT CATCTTGGCA GAAAGTCATG TTTCTGCGTG AGAATGGCGA GGTGGTGGTT TGTCCCACCG 002080
002081 TTCAGTGTAC ACAGTTGGGG CTGGAGTGAG TCAGTCACAA GGCAGGCCCT GCCCAGGCGG CGTGGGTGAC TGGGGATGAG 002160
002161 GTCTTCCTGT TGAGCATTTG AGGACTGCTG CACACGGGCC TGAGGCTGGC CTGAGGTGTG GAGGGAGCGC TGCTATGTGG 002240
002241 GGCATAAGAG TTGGTCACGG GTGACAGGAC GGAGGACCAC GGGCCAGGGT GTTTCCCAAC ACAGTCTGGT CTGAGCGGGA 002320
002321 GGCCAGGCCT CTGGCCTGTG TTTCTGAGCT TGAGTTGCAG GTGATAATGT TGGCACAAAA GACCTGCCAT GCCAGTCTGG 002400
002401 CCTCTTTCTC CACCTGTTTC CCGGTGAAGG AGCCAGGACC TGGCCTGCGA GTCTGTCCTG TTCTAGCAGT GAAGCCTGGT 002480
002481 TTGCCAGGCA CGGGGCTGGG AAGCAAGCAG TCTGGGTCTG GAGGGTGGCC CCAAAAAGGC CAACTCTGCA GCTCCACAGC 002560
002561 CACATGGGGG AGGCTGCCAC AGGTCACACT CCTTAGCCGG ATCCCCTCCT GAAGAAAAGC ATCTGAGCTG ACCAGCGAGA 002640
002641 CTGCAGTGGG GCAGACACTA TTAAATTTGC TGGCACAGCT CTGAGTACCC CCTCGCTTCC ACCCTGACTT CATCCCGCAG 002720
002721 TAGCTCTCAG CCCTCCCAGC CCCTGCAGGG CCACGTCTTT CTCTATTGCC GGTCAGCGTG TGTGTGCACA AAGCCCCTAA 002800
002801 GGTTTCATGT GTACACACCG GTGCTAAGTG TTTTTTACAC CCTTGTGCAT CTCTCGGCCT GGGGCTCCTG TGCAGGTTGC 002880
002881 CCTGAGAGTT GGGTTTTTAG TTCAAAAAGA AGGAACACAG ATGACTACTC TGCTGGCGAC ACGGCCACTC TGCTGGCACG 002960
002961 CACATAGCAT GGCGCCTCCT TTTTTGGGGG ACTCTCCTTG GTGGCATCTC TGGCAGGCTG TGTCCTCTCC AGCTGCAGTT 003040
003041 CTGGACCCTG TCTGGGTTGG GGAGGGGCAT TTGGTCCTCA GGCTGAGCCC ACCTGGATTC CCCAGGCCCT TGGTGAGCGC 003120
003121 CACTCTGGCT GCAACTCCCC TTGCCTGGCC CGTCCTGAGG CCCCTCTCTC GTCCTCAGTG GTGGTTCTGG CGGGGCTGTT 003200
003201 CGTGATGGTG TTGATCCTCT TCCTGGGAGC CTCCATGGTC TACCTGATCC GGGTGGCACG GAGGAACCAG GAGCGTGCCC 003280
003281 TGCGCACCGT CTGGAGCTCC GGAGATGACA AGGAGCAGCT GGTGAAGAAC ACATATGTCC TGTGACCGCC CTGTCGCCAA 003360
003361 GAGGACTGGG GAAGGGAGGG GAGACTATGT GTGAGCTTTT TTTAAATAGA GGGATTGACT CGGATTTGAG TGATCATTAG 003440
003441 GGCTGAGGTC TGTTTCTCTG GGAGGTAGGA CGGCTGCTTC CTGGTCTGGC AGGGATGGGT TTGCTTTGGA AATCCTCTAG 003520
003521 GAGGCTCCTC CTCGCATGGC CTGCAGTCTG GCAGCAGCCC CGAGTTGTTT CCTCGCTGAT CGATTTCTTT CCTCCAGGTA 003600
003601 GAGTTTTCTT TGCTTATGTT GAATTCCATT GCCTCTTTTC TCATCACAGA AGTGATGTTG GAATCGTTTC TTTTGTTTGT 003680
003681 CTGATTTATG GTTTTTTTAA GTATAAACAA AAGTTTTTTA TTAGCATTCT GAAAGAAGGA AAGTAAAATG TACAAGTTTA 003760
003761 ATAAAAAGGG GCCTTCCCCT TTAGAATAAA TTTCAGCATG TGCTTTC
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Predicted Small Protein

Name NONHSAT066197_smProtein_3494:3745
Length 84
Molecular weight 9817.5526
Aromaticity 0.204819277108
Instability index 43.5361445783
Isoelectric point 9.93548583984
Runs 14
Runs residual 0.0286479250335
Runs probability 0.0672268907563
Amino acid sequence MGLLWKSSRRLLLAWPAVWQQPRVVSSLIDFFPPGRVFFAYVEFHCLFSHHRSDVGIVSF
VCLIYGFFKYKQKFFISILKEGK
Secondary structure LLLLLHHHHHHHHHLHHHHHLLLHHHHHHLLLLLLEEEEEEEEEEEEELLLLLLLEEEEE
EEEEELLEEHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHH
HHHHHHHHHHLLLLLLLLLLLLL
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