NONHSAT066463
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066463 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1721 nt |
Genomic location |
chr19+:42041545..42043262 |
Exon number |
1 |
Exons |
42041545..42043262 |
Genome context |
|
Sequence |
000001 AAAAAAATGC TACAAGATAG CATCCAAAAA GCTTTTCTAG ACATTGGCTT AGGCCAAGTA GTCATGACTA ATGCCCCAAA 000080
000081 AGCAAACGCA AAAATATAAA AATAGAATAA GATCAATAGG ACCTAATGAA ACCGAAAATC TTCTGCAAGG CAGAAGAAAT 000160 000161 ATCAGCAGGG TAAACACACA ACCCACAGTA TAGGAAACAG TAGTCACAAA CTAGGCATCT GACAAAGGAC TAATGTCCAG 000240 000241 ACTCCAAAGG AACTGAAAGA AATCAGCAAG AAGAAAAGGT GCCATTTACC ACCTTCCTGA CTCATTGGCC AGAACCAATG 000320 000321 TTAGTGGAAT TAACATATGC CCCACCCCAA GTGACTTCTA AAGGGCTAAC TCACCACAAG GGAGTCAGAG CAGATCTTGG 000400 000401 ACTGAGACCT ACAGGACACA GGTACTGCTT TTTCTCTTTT ATTTGTTTTA AATTTTATTT ATGTTTTTAG ATCAAATAGT 000480 000481 TCAGATTGCA TTGGTTTTTA ATCTGCTGTT GTTGGATTAA CATATGCTTT AAGCGACTCT TAAATAGGTG GCTCACCAGG 000560 000561 AGAAAGGCAT AGCAGAACCT GGACTGAGAC CTACGGGAGA CAGGTATTGC TTTTTCTCTT CTAATCATTT TAAATTTAAT 000640 000641 TTACCATCTT TCATCAAATA GCTCCGATCA TATCATTATT TTTTTCTTTT CTGTTTTGTT GGTGGTTTTA TTGGTGGAGT 000720 000721 TTTATTTTAC TATTTTAGAA AAGCAGTCTT TTAAAAAAGA CTTTTAAAAA GTTTTATTAC TCTTTTTTTT AAAAAAATTA 000800 000801 TGTTTTCCCT TGATGTGCTT ATTTCCTTTA TAAAGATCAT CACCATTAAA TTACTAGGAG ACACTGCGGC TGATTTTGTC 000880 000881 ATGCGTGAGA TAAGAAATTT TTTGCCAAAG CAATTAGTGA TGAGTGCAAT GGAAAAATCC GTGATGATCT TTTAAGATGA 000960 000961 TTAACTTTCT AATCCAGAAA ATGCTGCTGT TTGTACTGAA CAAAATAGCT TTATTTTTAT ATGACCAGGG GTACATAAAA 001040 001041 TGCTTCAAAA CAACACATAA TTTGGCAAAA ATACTATGTC TTGCCAGCCA GAAGAATAAG TGTGGTTTTA TTTCTATGTA 001120 001121 TATGTCTAGT ACCATGCCTG CACTAGAGTT GGGAAATTTT AAAAACATCA CCTATTGATA CAGAAGAGAA GTGCTGGGAA 001200 001201 GGGAAGGGCA TGGTCCCTTT GAATGATACA GAAAAGGTGA AGGAAAGTGA TGGGTAGAGG AGGCCGGGGT CCCTGGCTAG 001280 001281 GGCTCCAAAC CTGAGCTTGT GCCCCTGGAC CTAGATGAGG ACAGGCATTT TTGTTTTCCT GACCAAATGT TGCATTTCCC 001360 001361 AAGATCACCC TGGCCCACCA TGCCCTATCC TGTGCCTAAA AAAACCCTGG GACCCTAGCA GGCAGACACA CAGGAGGTTG 001440 001441 GACGTCGAGA GGAGCACATC AGTGCAAGAA CACATGGGTG GCTGCCACTT CTCTCCCTTT CCTGAGAGGG AAAAACTCTC 001520 001521 GACGCTGAGA GGAATCCACC AACAGGCACC AGCACTCTGG CAGGCCACCG ACCAATGGAT TGACATAGAG TTTGGCTGGG 001600 001601 GCAGCCAGAG GAGAGCCTGG GCCGCTGAAT AACCCGACTT CAGGGGAAAA CTATTCTCCC TTTTGGCTCC CCCATCTGCT 001680 001681 GAGAGCTACT TCCACTCAAT AAAACCTTGC ACTCATTCTC C |
Predicted Small Protein
Name | NONHSAT066463_smProtein_956:1177 |
Length | 74 |
Molecular weight | 8436.1552 |
Aromaticity | 0.13698630137 |
Instability index | 53.7657534247 |
Isoelectric point | 9.47467041016 |
Runs | 9 |
Runs residual | 0.0208572691118 |
Runs probability | 0.0435729847495 |
Amino acid sequence | MINFLIQKMLLFVLNKIALFLYDQGYIKCFKTTHNLAKILCLASQKNKCGFISMYMSSTM PALELGNFKNITY |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLLEEEEEELLLL HHHHHLLLLLLLL |
PRMN | - |
PiMo | - |