NONHSAT066523
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT066523 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1955 nt |
Genomic location |
chr19+:42656721..42661675 |
Exon number |
2 |
Exons |
42656721..42656858,42659859..42661675 |
Genome context |
|
Sequence |
000001 CTTTTCCCGG AGCCGCACCC AGGTCCCCCA CCATCATGCA CCCCTTACCC AGGCCTCTGA GGGGCCAGGC ACCCCCCACC 000080
000081 ACTCCCCTAC AGCAGGAGAG CTTAGGGAGG CTGAGAGCTT GGACAGCCGG GAGAGGGGGC CGGATCTCTG GATCTCCCCA 000160 000161 GCCTCCAGAT CTCAGTGTGG CTCTCTCTGG AGACAAAAGC TAAGACTCAA CCCACAGGCA ACACTCAACA CAGAGATCCA 000240 000241 GCTCAGAAAA AAAGGAGCTG ACCAGGGAGG AATGGAGAGG CCAAGACACA TAATGAAGAC TAAGAAAAGG AAGAAAGATG 000320 000321 ATGCTGGGGC TGGAGCCAAA GGGAGAGGAA GAGGAAAGGA AGGAAAGCCA GGGGCAGAGA CCTGGCAGGG CAGCGTGAGC 000400 000401 CCAACAACCA CGGGGTGGGG GTGGGGCGCG CATCAAGATT TCTAACAAGC GCAGCTGAAA ACACCCAGGG CCGTTCTCTG 000480 000481 AGGCCTTCTC TCTGCCTACC AGCCCTCACC AGTGCTTCGA AGAGCCCTGA GGAACGTCTC TCTATTTGAA GTCAGAGCCG 000560 000561 AGTGCCTGCT CTCGGCACCT GGGGCTCCAT GCTTACCAGG ATGGTGGGTA CTTGACCTTC ATTTGCTGTG GGACTGTCAG 000640 000641 GGATTCCAGG GACCCACTGG TCCCCGAACT GGCTCAGAGA TGCAAGCCAC TTTTACCTCC TACACATCTA TAATCCCCAC 000720 000721 CCCATGGCTG ACAAATATTC CCAGTCCACA GCTGTCTCCA CCCACCCAGT GACAGAGCAC AGGCAGCCAA AAGGATCAAG 000800 000801 CAATCTCTTG CCACCTCCCA GCACCCCAGA ATGCTAAACA GACCCTCACA TCTGGACTCC ACATCCAGCG AGGAGTGCCC 000880 000881 CTGCCCACCA CCCAGATCAC ACAGCTGCCA GTTACAGACC ACCCTATAGG TCCCACCACA CGGCCATAGC CCACCAGCAT 000960 000961 CCCAGAGCTG CCTCTACACT AAAGCTCTGT CCCAGCCCAG CCATCCTTCA AGCCACATCT GGAATAGCAC ACACCCTATT 001040 001041 CCACTAGCCA AAGCCCCCAG GGGTGTAATT CAGAAGGAGG CAGACTGGGC CTGGGGCATG TGGACAAGTC CCTGACACCA 001120 001121 CGCCCTGGCT TCTCCGGCTT GTCTGAAGAA CCTGAACTGC CCTTAAGGCC TGCGCCTCCC ATCCCAGGGC AGCCCCCCCG 001200 001201 CCATACCTAC ACTCTTGGCC ATGGGAGAAT GTCCTCATGT GCGGCTAAAC ATCCTCCTCA TGCAGCCTTG AATTCTGTTC 001280 001281 CTTCCACGTC ACCTCACCAG ACCCAGGATG AAAGCCGCTC ACCTAGAGCA AAGCTTCTGC TTCCGAGGCA TTCAGGACTC 001360 001361 CCCTCAGGGT GTGTGAGCAC CCTGGGGCAC ATGCCTGTTG CTTATGTCTG GGTTACCTCT GTGACCCTGG GACCGCTCCA 001440 001441 CATTGAAGGC CGTTGTGTCT TTTTGTGGAA GGATGGAAGG ACAGAAGGGA AGGAGAGACA AAGTGGTACC ACAGCCCTGT 001520 001521 TCTTGCCCTG GCACTTGGAG GGCACCAGAT ACCCAGGGGA CTGTAGCTGG CTGTGAGGAC TCTAAGGCCA GGCCAGCATA 001600 001601 CACAGTCCCC AATAGTGAGT AGGAGCCCAG TCAGTCCACA CCCCTTCCCA TCCACTCGAA ATGTAACTTA GCCCTCGGCT 001680 001681 TCTCCTTACC TTTCAGGAGT TCTCTCCTTA CCCCCAAAGA CTTCCTGAGG ACCCCCTAGG CCAGCCAGCC TACCCCTCTC 001760 001761 TCCCCTAACC CAGCATCCTG CAGTCCCCTG GTTCAGATTG GTGGTGTCTG TGCCTGAACC CCCACGAGCC TGAAAGCCCC 001840 001841 TCAAAGGCCA CATGGGTCTC CCGCCTCTCT GCATCTCCAG ATGGTGGCAC GAGGCCTAGC ACACAAGGAA TCCCAGAAAA 001920 001921 TGTTGGCTGA AGGAATAAAT GGATGGATCT AGGTT |
Predicted Small Protein
Name | NONHSAT066523_smProtein_35:202 |
Length | 56 |
Molecular weight | 5797.5274 |
Aromaticity | 0.0181818181818 |
Instability index | 67.7854545455 |
Isoelectric point | 11.7052612305 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.0453198296336 |
Amino acid sequence | MHPLPRPLRGQAPPTTPLQQESLGRLRAWTAGRGGRISGSPQPPDLSVALSGDKS |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHLHHHHHHHHLLLLLEEELLLLLLLLEEEELLLLL |
PRMN | - |
PiMo | - |