NONHSAT066578
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066578 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
649 nt |
Genomic location |
chr19-:43521383..43523199 |
Exon number |
2 |
Exons |
43521383..43521753,43522922..43523199 |
Genome context |
|
Sequence |
000001 GGAGACTCCC AAGCCCTCCA TCTCCAGCAG CAACTTAAAC CCCAGGGAGG CCATGGAGAC TGTGATCTTA ACCTGTAATC 000080
000081 CTGAGACTCC GGACGCAAGC TACCTGTGGT GGATGAATGG TCAGAGCCTC CCTATGACTC ATAGGATGCA GCTGTCTGAA 000160 000161 ACCAACAGGA CCCTCTTTCT ATTTGGTGTC ACAAAGTATA CTGCAGGACC CTATGAATGT GAAATATGGA ACTCAGGGAG 000240 000241 TGCCAGCCGC AGTGACCCAG TCACCCTGAA TCTCCTCCGC ACTTATTAAT GACTGCCACA ACAGAAACAC TGTGAAAAAG 000320 000321 ATGCAACCAT GAAAAGGTGG AAAGTTTTGA TGACATAGAA AATAGCAATC AGCCTTTCTC ACATCCCAAA GCCTTCAAAT 000400 000401 ATATATGAGT GCAGCATGGC CAGTATGGAA TTCACCGAAA ACTAATCACC AAGCTAGAAA TGTGGTGAGA GAAAAAAAAG 000480 000481 GGCAAGAATA TATTTGGCTT ATCACTTCCC ACTTTTGTCT ACTAATCtga tgctgaaaag aaattctcac tgaagcattt 000560 000561 tagattttga atctttcaga tttgggatgc taaaccagta agtatatgac aaatatttca gaatcaaaaa atgtcagaaa 000640 000641 tccaaaaca |
Predicted Small Protein
Name | NONHSAT066578_smProtein_404:529 |
Length | 42 |
Molecular weight | 4853.5857 |
Aromaticity | 0.121951219512 |
Instability index | 46.0463414634 |
Isoelectric point | 9.62481689453 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0397203926615 |
Amino acid sequence | MSAAWPVWNSPKTNHQARNVVREKKGQEYIWLITSHFCLLI |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHLLLEEEEHHHHHHHEEL |
PRMN | - |
PiMo | - |