NONHSAT066589
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT066589 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
795 nt |
Genomic location |
chr19-:43698107..43699301 |
Exon number |
2 |
Exons |
43698107..43698746,43699147..43699301 |
Genome context |
|
Sequence |
000001 GAGCCTCCCT GTCAGTCCCA GGGTAAAGCG ACCCATTGAA AACAGGATCC TCATTCTACC CAATGTCACG AGAAATGAAA 000080
000081 CAGGACCTTA TCAATGTGAA ATACGGGACC GATATGGTGG CATCCGCAGT GACCCAGTCA CCCTGAATGT CCTCTATGGT 000160 000161 CCAGACCTCC CCAGCATTTA CCCTTCATTC ACCTATTACC GTTCAGGAGA AAACCTCTAC TTGTCCTGCT TCGCCGAGTC 000240 000241 TAACCCACGG GCACAATATT CTTGGACAAT TAATGGGAAG TTTCAGCTAT CAGGACAAAA GCTCTCTATC CCCCAAATAA 000320 000321 CTACAAAGCA TAGTGGGCTC TATGCTTGCT CTGTTCGTAA CTCAGCCACT GGCAAGGAAA GCTCCAAATC CATCACAGTC 000400 000401 AAAGTCTCTG GTAAGTGGAT CCCAGCATCC TTGGCAATAG GGATTTAGGT GGAGTCTATC TGGCATTCAG GGAAGAGTGA 000480 000481 GGAAAACATT TTTATTCCCA GCCTGTGTCC CATGGGCACA AGCAAATCCC AAATTCTACT CCTGAACACT CCCAATTtgt 000560 000561 ctaagaactt ccaaaacttt aacaaacagg ctgatatctt cttaaaattc ccagcctaga ccaagcagga gaaacattga 000640 000641 tttcattgaa ataattgaca atattgagga taatattttt atgattttta tttgaaaatt tgctgattct ttaaatggtt 000720 000721 tgttttctag atttatggaa tttttttctt ttaatctatc tatagcttgt agcagttcaa taaactatac ttctg |
Predicted Small Protein
Name | NONHSAT066589_smProtein_146:319 |
Length | 58 |
Molecular weight | 6079.8245 |
Aromaticity | 0.0526315789474 |
Instability index | 87.3333333333 |
Isoelectric point | 7.97991943359 |
Runs | 11 |
Runs residual | 0.0390350877193 |
Runs probability | 0.046763340881 |
Amino acid sequence | MSSMVQTSPAFTLHSPITVQEKTSTCPASPSLTHGHNILGQLMGSFSYQDKSSLSPK |
Secondary structure | LLLEEELLLLEEELLLEEEEELLLLLLLLLLLLLLHHHHHHHHLLEEEEELLLLLLL |
PRMN | - |
PiMo | - |