NONHSAT066709
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066709 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1108 nt |
Genomic location |
chr19+:45189652..45190759 |
Exon number |
1 |
Exons |
45189652..45190759 |
Genome context |
|
Sequence |
000001 cgcctcccag gctcaagcaa ttctcctgcc tcagcctacc aagtagctga actacaggtg cacaccacct cacccggcta 000080
000081 cttttttttt tttttttgta ttttcagtag agacaagttt caccatgctg gccaggctgg tctcaaactc ctgGCTCTGC 000160 000161 AGACAGGAGG ACTGAAATCC ATggtggcag acgcctataa tcccagaact ttgggagacc aaggcagacg gattacttga 000240 000241 ggtaggagtt caaggccagc ctggccaaca tgctgaaata cagtctctac taaaaataca aaaattagcc gggagtggtg 000320 000321 gtaggttgag acaggagaat cgcttgaatc cgggaggcag aggttgcatt cagccgaggt catgccactg cactccagcc 000400 000401 tgggcaacag agcaacactc TAGAACAAAA CATTGACAGA ATTTGTTTCT GGTTTGGATA CAGGGGATTG GAGAGAAGAG 000480 000481 TGTGCCAATA ATTGGTTTGt tcatcaattc aatgaagatt tattgagcat ctgttgtgga cagccctatt ctaggttctg 000560 000561 gggagacagc catgaatgag acagtgatgg ctgcttttgg agagctgacc ttctagtggg agacaggcca cagaaaaaca 000640 000641 aagcacatgg aacataatgt cagggatgac gatgctgtga aggaatggag caggtgctaa gaacctactg gaacgggcaT 000720 000721 GCTTAAGAGG TGCTGGAGAG GGTCAACTCT TGGGTGACTG CTTCGAGCAA TGGGAGGGTG GGGAGCAGGG GTGTTGTACA 000800 000801 CACTGCGACA GGGCCAGGTT TGcaaaagaa atcaagacat ggccacacaa acacttctgt gtgactgttc acagcagcat 000880 000881 tattcacaat agccaaaagg tagaaataac ccaaatgccc atgaacagac gaatgAGTTC TTTTGtttat ttgttttgtt 000960 000961 ttgtttttgt ttttgagaca gtcttactct gctgcccaga ctggagtgca atggcgcaat cttggctcac tgcaacctcc 001040 001041 acctcctggg ttcaagccat tctccttcct cagcctccgg agtagctggg actacaggcg cccaccac |
Predicted Small Protein
Name | NONHSAT066709_smProtein_914:1084 |
Length | 57 |
Molecular weight | 6478.6021 |
Aromaticity | 0.160714285714 |
Instability index | 69.6196428571 |
Isoelectric point | 4.93182373047 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0601736189971 |
Amino acid sequence | MPMNRRMSSFVYLFCFVFVFETVLLCCPDWSAMAQSWLTATSTSWVQAILLPQPPE |
Secondary structure | LLLLLLLLEEEEEEEEEEEEEEEEEELLLHHHHHHHHHHHLLLHHHHHHHLLLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiii |