NONHSAT066769
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066769 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1419 nt |
Genomic location |
chr19+:45706606..45714492 |
Exon number |
3 |
Exons |
45706606..45707309,45713022..45713084,45713841..45714492 |
Genome context |
|
Sequence |
000001 actgcaatct ctgcctcttg ggttcaagcg attctcctgc ctcagcctcc taagtagctg ggattacagg cgtgcgccac 000080
000081 cattcccagc taatttttgt atttttagta gagacggggt ttcaccatgt tggtgaggct ggtctcgaac tcctgacctc 000160 000161 gtgatccgcc tgcctaagct tcccaaagtg ctgggattac aggcatgagc caccgcgccc agcctcaagt tgatttaggg 000240 000241 tcccagagca ctttggcccg cagtggctag gcatgccaga actcaggttc tcaccactag aatagatgat ttccctctgt 000320 000321 ctaatgatca tttaaatgct ccctccatgg gtggtgtctg atttctgccc catggtgctt tccactgtaa tagaacagcg 000400 000401 ctgagttcca atgcaaagcc tcaaatcagt cactgagctc tccctacccc aaatgcacag attctctctc cttgccatct 000480 000481 gactgctgcc aggagatgtg ggaggggtgg catTTTGGGG TAGCACCTCA CCCCAAAAGC CCATTGGCTT AAAATAGCAG 000560 000561 TCCCATCCCA AAATCTcaaa ccaccccaaa agctcattgg cttaaaatag cagtcaaata tgacatctca tggttcagta 000640 000641 ggttaagtgg gtttaacCAG TCGAttcttt tttttttgag atggagtctc actatgtcgc ccaggctgga gtgcagtggc 000720 000721 accatcttgg ctcaccatct ttgctcaccg caacctctgc ctcccgggcc acctcacccg gccACttttt tttttttctt 000800 000801 ttttaatgag acaaggtctc acctatcatc taggctacaa cgcagaggca caatcacagc caactgcaac cttgaacacc 000880 000881 tggcttcagg cgatcctccc acctctgtgt cccaaactgc tgtgtgagcc actgtgccca gcCAAAAGCT GTTTTTCAAT 000960 000961 GGAGGACCAA CATCTGAAAA GTACATTGAC AAACTGAGGC TCTTATATGT TTAATTCAAC GCCTACAGGG CAGTGgcagt 001040 001041 ggctcacgcc tgtaatccca gcactttggg aggatgaggc aggaggatgg cttgaggcca acctggtcaa catagtgaga 001120 001121 ctctgtcttt acaaaacaaa taaaatatta gctgggtgtg ctggcacgag cctgtagtcc cagctactca gaaggctgag 001200 001201 gtgggaggat cacttgggct aggaggtaga ggctgcagtg agctatgatc gtgtcattgc actccagcct gggcaacaga 001280 001281 gcaaagaccc tgtctctaaa aaataaataa taaaTGTCTA TGGACTGCAC AATATTGTTG ATTCCTCAAC TCCTCTCTTG 001360 001361 CTCTTTTGCA TATTGGCAAC ATAAAAAGTG TCATTTTCGg gctgggcaca gtggctcat |
Predicted Small Protein
Name | NONHSAT066769_smProtein_680:805 |
Length | 42 |
Molecular weight | 4522.0204 |
Aromaticity | 0.170731707317 |
Instability index | 59.2463414634 |
Isoelectric point | 6.89300537109 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0406386778937 |
Amino acid sequence | MESHYVAQAGVQWHHLGSPSLLTATSASRATSPGHFFFFLF |
Secondary structure | LLLHHHHHHLLLLEELLLHHHHHHLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |