NONHSAT066814
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066814 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1410 nt |
Genomic location |
chr19-:46273214..46274623 |
Exon number |
1 |
Exons |
46273214..46274623 |
Genome context |
|
Sequence |
000001 GGATCCACCT TCCCATGTAA GACCCCTCTC TTTCCCCTGC CTCAGACCTG CTGCCCATTC TGCAGATCCC CTCCCTGGCT 000080
000081 CCTGGTCTCC CCGTCCAGAT ATAGGGCTCA CCCTACGTCT TTGCGACTTT AGAGGGCAGA AGCCCTTTAT TCAGCCCCAG 000160 000161 ATCTCCCTCC GTTCAGGCCT CACCAGATTC CCTCCGGGAT CTCCCTAGAT AACCTCCCCA ACCTCGATTC CCCTCGCTGT 000240 000241 CTCTCGCCCC ACCGCTGAGG GCTGGGCTGG GCTCCGATCG GGTCACCTGT CCCTTCTCTC TCCAGCTAGA TGGCCCCCCG 000320 000321 GCCGTGGCTG TGGGCCAGTG CCCGCTGGTG GGGCCAGGCC CCATGCACCG CCGCCACCTG CTGCTCCCTG CCAGGGTACG 000400 000401 TCCGGCTGCC CACGCCCCCC TCCGCCGTCG CGCCCCGCGC TCCACCCGCC CCTTGCCACC CGCTTAGCTG CGCATTTGCG 000480 000481 GGGCTGGGCC CACGGCAGGA GGGCGGATCT TCGGGCAGCC AATCAACACA GGCCGCTAGG AAGCAGCCAA TGACGAGTTC 000560 000561 GGACGGGATT CGAGGCGTGC GAGTGGACTA ACAACAGCTG TAGGCTGTTG GGGCGGGGGC GGGGCGCAGG GAAGAGTGCG 000640 000641 GGCCCACCTA TGGGCGTAGG CGGGGCGAGT CCCAGGAGCC AATCAGAGGC CCATGCCGGG TGTTGACCTC GCCCTCTCCC 000720 000721 CGCAGGTCCC TAGGCCTGGC CTATCGGAGG CGCTTTCCCT GCTCCTGTTC GCCGTTGTTC TGTCTCGTGC CGCCGCCCTG 000800 000801 GGCTGCATTG GGTTGGTGGC CCACGCCGGC CAACTCACCG CAGTCTGGCG CCGCCCAGGA GCCGCCCGCG CTCCCTGAAC 000880 000881 CCTAGAACTG TCTTCGACTC CGGGGCCCCG TTGGAAGACT GAGTGCCCGG GGCACGGCAC AGAAGCCGCG CCCACCGCCT 000960 000961 GCCAGTTCAC AACCGCTCCG AGCGTGGGTC TCCGCCCAGC TCCAGTCCTG TGATCCGGGC CCGCCCCCTA GCGGCCGGGG 001040 001041 AGGGAGGGGC CGGGTCCGCG GCCGGCGAAC GGGGCTCGAA GGGTCCTTGT AGCCGGGAAt gctgctgctg ctgctgctgc 001120 001121 tgctgctgct gctgctgctg ctgctgctgc tgctgctgct gGGGGGATCA CAGACCATTT CTTTCTTTCG GCCAGGCTGA 001200 001201 GGCCCTGACG TGGATGGGCA AACTGCAGGC CTGGGAAGGC AGCAAGCCGG GCCGTCCGTG TTCCATCCTC CACGCACCCC 001280 001281 CACCTATCGT TGGTTCGCAA AGTGCAAAGC TTTCTTGTGC ATGACGCCCT GCTCTGGGGA GCGTCTGGCG CGATCTCTGC 001360 001361 CTGCTTACTC GGGAAATTTG CTTTTGCCAA ACCCGCTTTT TCGGGGATCC |
Predicted Small Protein
Name | NONHSAT066814_smProtein_692:877 |
Length | 62 |
Molecular weight | 6184.2896 |
Aromaticity | 0.0327868852459 |
Instability index | 48.0147540984 |
Isoelectric point | 11.4000854492 |
Runs | 6 |
Runs residual | 0.0544563783682 |
Runs probability | 0.0215804039333 |
Amino acid sequence | MPGVDLALSPQVPRPGLSEALSLLLFAVVLSRAAALGCIGLVAHAGQLTAVWRRPGAARA P |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHEEELLLLLLL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL L |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii i |