NONHSAT066908
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066908 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1320 nt |
Genomic location |
chr19+:47164735..47174598 |
Exon number |
3 |
Exons |
47164735..47165694,47172425..47172567,47174398..47174598 |
Genome context |
|
Sequence |
000001 TCCATCCTCT TGCGGGCGAG CGCTGGCTAC CATTGGACTG TCCGGCGCGA GGGGAAGGGT GATCTATAAA TAGGGAATGG 000080
000081 GTACACGTGA CAGTTTGGCA GCTGCTCCTA CCCCTCCACC CCGCCCAACC TTCAGCTTCT GAGGCTGCGC AGGGGGAGAA 000160 000161 AAGGGTTAGG GGGTCGAGCC CTGACTTCGC CTCCTCTTCC AAGAAGCCTT CCCAGACACT CAGCTGTAAA ACCAGACGGA 000240 000241 CGTCCTCCGA TAAAATTGTT TCTACTTAGG GCCGGCTTCA CCGGCTTGGA ATCCACTTAG AAGGGTCTTC GCGCTTGGTT 000320 000321 GAATGTTCTG CAATTTCTGT CTTGAAATTT TTAGTTTTTG AGCAAGGGGC CCCTTATTTT CACTTTGCAC TAGGCCAAAT 000400 000401 ATGTAGCCGG TCTTGCTGCT AAGAGTCTAA GATCGATTGC ATTCCAAATT CTGGAATTAT AAGACCCTGG GTGGAAGATT 000480 000481 CTATGCTTTG ACCAGAAGAG AGTCTAAGCA GCTTTTGTCT CCCAGGTGCT AGGAGGATGT GTGCTCATCA TTCTTCCATT 000560 000561 CCAGGGGCCT TTGTTCTACG TTCTAAGGGG CTTTGTTCTC AGCCTTCTAT GATGCTCTAT TCTCAACGTT CTCTGGTCCT 000640 000641 AGGAGTCTGA GCCTGACATT CGTTTCCAAG GCTTCCTGCT GTCTCTCCAG GCTCCGCAAG CAGGGCTGGG GCACCCTCAG 000720 000721 GCGGCCAATC TGTATCACTA CGCCGAGCCT GCCTCTACCA ACTTCCAAGA CCTAGCTCTA ATATTCATAC TCATCTCTCA 000800 000801 GACAGACCTT GGCTCCCTAA AAGCCAAGGC CCAGAAGATC ATACAAGAAA TTCCCTCTTT TATGATTCCC CGTGCACGAA 000880 000881 GTGACCTTCT GGTGGTGAGA TGGAGAGAAA TTGATAGTGG CGATAGACAG CAAAGTCTCC AGGAGCCAGA CTTCCTCGGG 000960 000961 AAACTTGGGG CACGTGTGGA GTGTGAGTGA GTGAGCTGCT GGAATGAATT GACCAGACAG GACATCATCT ATGTATGGGA 001040 001041 TTAGAATGGA ATTACAGGAG AAAACCAAAT CCCTCAAATT AGCATTCAGG ATCGGAAAAA AAATGTCAAG TCCAATGTCC 001120 001121 CTTTTCTTTA CAGTATATAC AAGTGTCTCT ATCAACATTA GGTTTTGAGG TTGAGTGCAG TGGCCCACAC CTGTAATCCC 001200 001201 AGCACTTTTG AGAGGTGGAG GATCGTTCAA CCCCAGGAGT TCAAGACCAG CCTCGGCAAC ATAGTGAGAC CCCATCTCTA 001280 001281 TAACAAATAA AAAACATGCC CGGGAAAAAA AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT066908_smProtein_536:649 |
Length | 38 |
Molecular weight | 3992.7366 |
Aromaticity | 0.0540540540541 |
Instability index | 56.272972973 |
Isoelectric point | 9.49847412109 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0277446564212 |
Amino acid sequence | MCAHHSSIPGAFVLRSKGLCSQPSMMLYSQRSLVLGV |
Secondary structure | LLLLLLLLLLLEEELLLLLLLLHHHEEEELLEEEELL |
PRMN | - |
PiMo | - |