NONHSAT066923
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066923 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
576 nt |
Genomic location |
chr19+:47249314..47258706 |
Exon number |
5 |
Exons |
47249314..47249347,47250491..47250562,47251284..47251345,47251772..47252141,47258669..47258706 |
Genome context |
|
Sequence |
000001 cATTGCTCCA AGATGGCGGC GGCGGCGGCA GCGGAGGAGA TGCTCTGCTG AGGGGCAGTT GCTATGGTTA CAGGGCCTGG 000080
000081 ACCTTCCTCC GGAAGGTGAG AAACAGGAGC GCAGCTCAGC TGGGCTGGAA CTGCCCTCCT GGAACTCCCC CAGCCTACAA 000160 000161 CCTAGGAGgt gcagggactg aggctcagGC CAAATCGCAA CTCAGACCCA GTGAACCCAA GGCCTGAAGA GAATTTGGAT 000240 000241 TCATTTACCT TGTTTTGTGG GGACTGGAGA GACAAGTAAA CTCTCAGAGT AACTGTCCCC TCTGACTACC ATTTCTAAGG 000320 000321 CAAGCCCCCT GTTTCTACTC TTGCGCCCCC TGCTGGTTTC CTGCCCTGTC TGTAAGTTGC ATGGCTTTTG TCCGtctttt 000400 000401 ttttgtttgt ttgtttgttt tgagacaggg tctcacccag gctagagtga agtggagcaa tctcggctca ctgcaacctc 000480 000481 cgcctcctga gttcaagtga ttctcacacc tcagcctccc caatagctgg gattacagGA TGCCCCGGAG GCCCAGCTAG 000560 000561 CCCCAGACTT CGGCCC |
Predicted Small Protein
Name | NONHSAT066923_smProtein_380:499 |
Length | 40 |
Molecular weight | 4522.3863 |
Aromaticity | 0.153846153846 |
Instability index | 53.7666666667 |
Isoelectric point | 10.9160766602 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0417770711889 |
Amino acid sequence | MAFVRLFFVCLFVLRQGLTQARVKWSNLGSLQPPPPEFK |
Secondary structure | LEEEEHHHHHHHHHHHLHHHHHHHHHHLLLLLLLLLLLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL |
PiMo | i?????????????????????????????????????? |