NONHSAT066972

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT066972

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1753 nt

Genomic location

chr19+:47987539..47999639

Exon number

3

Exons

47987539..47987781,47996704..47996858,47998285..47999639

Genome context

Sequence
000001 AGCTGCCGGC GTTGCCCTCT CCCAAGATGG CGGCCAGGTC GCCTGCTCGG GCCTCCCAGG CGACTTTGCC CCACTGCGCC 000080
000081 CGCGCTCTCT TCTCCTTTCC ATTTCTGGAC CAAGGGGCTG CCATAAGGAG TCTGTGACTA GAGATGGGAG GTGGTGGCCA 000160
000161 CGGCCTCTCG CTGTATGCTG TGTGGAAGGT CGAATCATCA TCATCATAAA ACTTAATATT GCCCTTATGT GCCAGGAACT 000240
000241 ACTATCTCAG CAATGGAGAT GTGGTGCTTG GCCGCAATCG TGAATCGGCC CTGGAGGGGA CACAGGAAGG GGCTGCCTGC 000320
000321 GACTCATGAC CTCCTGCGTG CCTGCCTGCT GACCTATGAC CCTTCAAGTT CCCACCCCTC AGCCACGCCT GTGAGGAGGG 000400
000401 TCTTGTTTTG TCGCCTACGC TGGAGTGCAG TGGTGTGATC ACAGCTCACT GCAGCCTCAA CTTCCTGGAC TCAAGCGATT 000480
000481 TTCCTGCCTC AACCTCCCAA GAACTAGGAC CCCAGGTGCA TGCCACTACA CCAGGCTAAT TTGTTGTAGA GAGGAGGTCT 000560
000561 TGCTATGTTG CCCAGGCTGG TCTCGAACTC CTGTGCCCAA AAGATCCTCC CACCTCAGCC TCCCAACATG CCAGGATTAC 000640
000641 AGGCATGAGC CACCCTGCCC AGCTCAATAA CCTAAGTTCT ATGAATGAAA ACCATGACTG CCTGTGGAGT GAGGGGGCCG 000720
000721 TCAGGCTGGT GGGGAGCTGG GTGAAGACCC AGCCAGCCCA GGCCAGCTCA GGTGACCTAA TCCCCCCAGC TCCCACTTCC 000800
000801 CCCTCCCCAA GTGGTTTGGC CGCAGAATAA GAACAGTGCT GGGGGTGCTG AAAGAGGGGA CGCAAGGCTG GGGCAATGCA 000880
000881 GTGGGACCCG GGGGTGTCAG GACAAGCAAG CAGCCCTTAC CATGTCTGTG TAGATCTCGA TTGCTCGCAT CAAACAGTTA 000960
000961 ATGGCCTCTG GAGAGAAAGG GAGGTGGGAG GAGACATGAG AAAGTGAAGT CGTTTCAGCA GAAGCTGAGG AGAGGAGGCG 001040
001041 GACGCAGGCG CACCTGGCTG CCAGCAGAGA GATCAATAGG CGCTCAGAGC TGCCAGCGCT GCCACACACT CTCAAGGGGC 001120
001121 TGGGAAGAAG GGGACGGAAT CCCTGAGCCC CAGGAAATCT GGTGAGAGGG CTGACTCTGC AGACTGTGAC TTGCTGGGCA 001200
001201 CATGCTTCTG GGGGAGCCCT TCTCTCCTCA GGCTGCCAGG ATGCTACCAG CTTCCCACAA CCCCAGGGAC AGGGCACAGC 001280
001281 AGTGCTAGGC CAGGATGATG GCCAGACTCC CACGGTGTTT TAAGACAGAC CTGCCAAGGC CCTGCTCTTG AAGGACTGAG 001360
001361 CTGCTGGCAA AGGGGAAGGA GGCATGGGAG GCGGCCAAAC CAGCATCTGA GGTGGTCTTG GAGGCAACAG GGTGCCAGGT 001440
001441 TCTACCTGGG CTCTGCCACC ATCTCTGCAG GATCCTGAGC AGCTTCTGCT CCTGCACCAG GAGGACCTGG ACCTCTGGCA 001520
001521 CGAGGAGGCT GGATGTCATC AACACTGAGC CCTCAGTGTG CTCTCCACTG CCCCCTCTTC CTCGTAGCTC AGCAGTCGGG 001600
001601 AGCCCTCTGC TCAGTCCCTT TAACCTAGTC CTGCCACCCA CCAGCTCCTC AAAGGTTTTG CCAAAAAACC TGAACACACC 001680
001681 AGGATAGCAC TGAGGAAGAA CTGGGCTACC TTTGTTGTAC TATCTCTTGC AAGATTTTAA ATTTGGGAAA GGC
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Predicted Small Protein

Name NONHSAT066972_smProtein_644:829
Length 62
Molecular weight 6340.9553
Aromaticity 0.0327868852459
Instability index 66.3885245902
Isoelectric point 5.00848388672
Runs 9
Runs residual 0.00527605049934
Runs probability 0.0120905218944
Amino acid sequence MSHPAQLNNLSSMNENHDCLWSEGAVRLVGSWVKTQPAQASSGDLIPPAPTSPSPSGLAA
E
Secondary structure LLLHHHLLLLLLLLLLLLLHHHHLLEEEELLEEELLLLLLLLLLLLLLLLLLLLLLLLLL
L
PRMN -
PiMo -