NONHSAT067416
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067416 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1236 nt |
Genomic location |
chr19-:51666261..51685226 |
Exon number |
4 |
Exons |
51666261..51666877,51668102..51668170,51668478..51668530,51684730..51685226 |
Genome context |
|
Sequence |
000001 GGCTGGGCCC AGGGCGACAG CGGAGCCTTC ACACCGCTTT CTCCGCGCGC TGATGGAGGA TTCCTGGCCT CACAGCAGTG 000080
000081 CCTGGCCTGT GGGCGTCCCC GGCAGTCCTC GGCTGCGGGA CCTGTATCGG GACTGCGCAA AGTGGGCTTC CAGGAGAGCA 000160 000161 GGGCGTCCCT CAGTCAGCTG ACCCCTTGGA GCGTGGGGCA GCCCAGGCCC GTGAGGCCGC CAGTGTCACC CTCAGGCCCG 000240 000241 CGAGGCCCCC GAGCCCCTTG TGGGGTCCAA GGCCCATTCT GGATCAGTCA CGAGGCAAGA CCGCGGACCC TCAGGAGATC 000320 000321 ACCAGGAGCC CGCCGCGCAT TCCTCCGCCT CCACCACGCC AGTCACCTGC TCAGCCCGAG GGCAGCCAGC GGCCGTCGCC 000400 000401 CCAGTGAGGC GGCCGGTGAG GAGCTGAGGC CGTGACCAGG GCAGCGCCCC GCGAGTCAGC GTCAGTCCCC GCGCCAGCCA 000480 000481 GTTCCTCAGA CAATCAGctc accattccca tcgcgtatgc tgggaaatca tcaatatacc cgctgtcatg gaattgcaga 000560 000561 atcgttatcc aaatggcttt gacttttacc actactccca gccatgcacc agaattccgA TCCATTTCTC TGTTCCTTTT 000640 000641 TGTGTTTCTG CAACATGACC TCAGTTCTCT CAGGAAGCCC CAAAACCTGT GAAACTAACC TGTGCTTGCA GCTCTGCTTG 000720 000721 CTGCCAGAAA CAAAGGCTGG GAGCCAGCAA CAGGAACCAG CCAGGGGATG AGTTCAGCCC AGACGTGCTG CCTGGACCTG 000800 000801 GATTCCTGCC TCAGTGCAGG CCTTGACCTG ATTTcttgct tcattaccat actaaaatct ccactcaggg gcgagaacta 000880 000881 tgccttGCTA GGCACAGAAG GTGCCAAGTA CAAAAGAAAA CACAAGAGTG TGCACACTTC AGCCCCTCCT GAAGGAACCC 000960 000961 ACCTTTTTCC AGATCTGCCC GCCTCAGTCT CCAACTACCT GCCCTAAGGG Cccttaagat ccccttttac caacccctgg 001040 001041 gagaaggtgc tttgcacatg aactcccttt ctccatttct tgatcaatga ataaaGTTTC TTCTCCGCTT TGCCGATTCT 001120 001121 GGTCTCATTC TATTGGCGTA AGTGGCAGGG GGCAGAGAAA GGACCCACTA GGGCCAACTC ACCCCTCCAA GGGTGGGTAA 001200 001201 CAtttgcagc aaaactcctc aagaggttgt ttgtcg |
Predicted Small Protein
Name | NONHSAT067416_smProtein_767:1006 |
Length | 80 |
Molecular weight | 8480.6605 |
Aromaticity | 0.0632911392405 |
Instability index | 65.0291139241 |
Isoelectric point | 6.79888916016 |
Runs | 13 |
Runs residual | 0.0242760534073 |
Runs probability | 0.0490807549631 |
Amino acid sequence | MSSAQTCCLDLDSCLSAGLDLISCFITILKSPLRGENYALLGTEGAKYKRKHKSVHTSAP PEGTHLFPDLPASVSNYLP |
Secondary structure | LLLLLEEELLLLHHHHLLLLHHHHHHHHHLLLLLLLLLEEELLLLLEEELLLLEEELLLL LLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |