NONHSAT067545

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT067545

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2047 nt

Genomic location

chr19-:52897580..52901010

Exon number

4

Exons

52897580..52899003,52899569..52899752,52899863..52900005,52900715..52901010

Genome context

Sequence
000001 GGGCCGGGAC AAAGCCTGGG CCGGGCCTGC GCTTCCGTTC GCTTGACTGG CTGCGCTTGT TTTCAGGGTT TTGGTCTGAA 000080
000081 AACGGATCTT ACCTGCGCAG AGCAAAATCG GTTGTAGATT ATATCCACGA AAATTCCTTC TATTAAAATG AATTTCAAGT 000160
000161 CCCACCTACC CTGGAAGCAG AAAGAGAGAG AAGAGAGAGA GTAAAGAGAA AGAGAAAAGA AAGAGAAGTT GAAAAAGAGA 000240
000241 AAGAAAACCA AGAAAGAAAG AGAAAAAAAC CGAAAATAAA TGGACAAGAA AGAAAAAGAT GTAGTCTGGT TTTGTTGCCC 000320
000321 AGGCTGGTCT CCAGCTTCTA GCCTCAAGCA GTCTTCCCAT CTGCTCCTAC CAAAGTGCTC GGATTATAGG CATGAATCAC 000400
000401 CTTGCATGGG AGATAAGGAC CCCCACATCA AGCCCTCAGG TCACTGGGAT CCTGGACTAC GGCACTGCTC CAGGCAGGCC 000480
000481 TGGTTATCCT GCTTGAGGCA GCAATCCTCT TGAGCCTAGT GAAATGCAAC TGGCTGTACC TCAATGATGT TGCCCTGAGA 000560
000561 TTCTGCCAGT CGAGGTATTA CTTCAATCTC CTGAGACCAG CCTCTACCTC CAGATCCAGG GAGGCCAACG TGCCATGCAT 000640
000641 CCCTGGAGCA TGAAACCCAG GATGGGCCGC CTTCCAGCCT CCCACAGCTG TGATGCAAGT TGAACACATA CAGAGAGACT 000720
000721 GCATCTGCAC TGGGTGGTTT TCCTGAGCCT TGGGGAGCAG AATGCATGAA TCCCAGGTAT CTGCCGATCT GTATGTAACA 000800
000801 AATTCACTTC ATGTAACTTA CTGTGTGTCC GTGAGATTAT CTCTCACTCA ACTCAGACAC ATTGGCAACC AGTGTGCAGT 000880
000881 GAACCTGCTT CACAAGCAAG GATGTGGAGA AACTATTTTC GTACATTTTG TGGGAATCTG AAATACTGCG GTCAGTATGG 000960
000961 AAAGCAGTAT CATGGGAAAC TTCCTCAACT CAAGATCACC TACCAATCCT TACAGAATCA GAATCATCAT ACAAACTGGT 001040
001041 GAAAGCATAG TTTCCCCTAG AGGTTGGGAT GAGGGCAAGA ATGTCCCCTC TTATCACTAC TATTCCACAC AATATGAAAG 001120
001121 GTTCCAGCCA GTGAAATAAA GGAAAAAGAA ATAAAAGTGA CAGGCTGGGT GTGGTGTCTG AGGCCTGTAA TCACAGTGCT 001200
001201 TTGGGAGGCT GAGGAAGGAG GGTGGCCTGA GGACAGGACA AAAAAAATAG TGTACCAACA GAAAATATGT TGGTTGTGCA 001280
001281 GGCTAATACC TTTCCCAAAG GAAGGTAGCT ACATCCCTAT GACCTGTGTT ACTGGATATA TCAAAAGGGA GTTTGCAAAT 001360
001361 GTGGTCTAGA TAAGGATCTT TAGATAGACA TCCTGAATTA TATGGTCAAA GTGATAGAAT CACAAGGTTC AATATCAGAA 001440
001441 GGGTGCAGGT GGATGCGAAG GGACAGAGAC AGTGGTGATG TGTTGAAAAT AGAGGGATAA AGAGATTTTT TTTCTCACCT 001520
001521 TTAAAGATGG AGGAAGTGGA CCATGAGTCA AAGGATGTAA GTGGCCTCTG GAACCTACAA AGGGTAAGGA AACAAATTCT 001600
001601 CCCCTGGAGA TTAATGAAGA ATCACAGAAC TATGGACCCA TATTAGATAT GTGACTTACA GAATTATAAA AGAATAAATT 001680
001681 TTTCTTGTTT TAAGCCAATC ACTGTGTATA GCAATAGGAA ACTGATGAAA TGATTTTATG TAGAAAATTC CAAAAAAATC 001760
001761 TACAAAAATC TCTAGAACAA GAAAAATGTA AAGGTAGCAA AGTATAAGGT CAACCTACAA AAATATCGTA TATTTCATCA 001840
001841 GCCAGGCATG GTGGCTCGTG CCTGTAATCC CAGCACTTTG GGAGGCCAAG GCAGGCAGAT CACTCAAGCT CAGGAGTTTG 001920
001921 AGACCAGGCT GGGTAACATG GTGAAACCCC ATCTCTACAA AACACAAAAA TTTAACAGGC CATGGTGGCA CATGCCTGCA 002000
002001 GTGCCAGCTA CTGGGGAAGC TGAGGTGGGA GGATGACTTA AGCCTGC
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Predicted Small Protein

Name NONHSAT067545_smProtein_1847:2035
Length 63
Molecular weight 6880.7886
Aromaticity 0.0806451612903
Instability index 43.1919354839
Isoelectric point 9.62127685547
Runs 9
Runs residual 0.00847926267281
Runs probability 0.0402265010108
Amino acid sequence MVARACNPSTLGGQGRQITQAQEFETRLGNMVKPHLYKTQKFNRPWWHMPAVPATGEAEV
GG
Secondary structure LEEEEELLLLLLLLLLEELHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEE
LL
PRMN -
PiMo -