NONHSAT067581
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT067581 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1244 nt |
Genomic location |
chr19-:53226674..53227917 |
Exon number |
1 |
Exons |
53226674..53227917 |
Genome context |
|
Sequence |
000001 GAGAATTTAA CAGGGAGAGC AGAGGAGATG GAGAGATAAG AGAAGAGGCG GTAATATATA GAGATTGAGG ACGATTGAAA 000080
000081 GATTGGGGAG AAGGAGCAAC AAGAGGTTAA ATAAGGTTtg gggaaaaaaa agagagatca gactgttact gtgtctatgt 000160 000161 agaaagaagt agacataaga aaccccattt tggtctgtac taagagaaat tagtctgctt tgagatgctg ttaatctgta 000240 000241 accctagccg caaccctgtg ctcacagaaa catgtgctgt gttgacccaa ggtttaatgg atttagggct gtgcaggctg 000320 000321 tgctttgtta aaatgtgttt gcaggcagta tgcttggtaa aagtcatcgc cattctccag tctcgagtac cctgggacag 000400 000401 aatacactgt ggaaggccgc agggacctct gcccaagaaa gcctgggtat tgtccaaggt ttctctccac tgagacagcc 000480 000481 tgagatatgg cctcgtggga agggaaagac ctgaccatcc cccagccaga cacccgtaaa gggtctgtgc tgaggacggt 000560 000561 tagtgaaaga gatagccctc tttgcagttg agataagagg aaggcctctg tctcctgctc ctccctggga atggaatatc 000640 000641 ttggtgtaaa acccaatcgt atgttctgtt tacagagata ggagaaaact gccttatggc tgtaggtgag acatgctggt 000720 000721 ggcaatactg ctgtttactg cactgagatg tttgtgtaaa gtcaaacata aatctaccct acatgcacat cgaggtacag 000800 000801 catctttcct taaacttatt tatgacacag agagctttgc ttacatgatt tcctgctgac cttctcccca ccattaccct 000880 000881 acagtccttc cacatccccc tctctgagat ggtagagata gtgatcaata aatattgagg gaactcagag acctcggctg 000960 000961 gtgcggatcc tccgtatgct gagtgctggt cctctgagcc cactgttctt tctctatacg ttgtctctgt cttatttctt 001040 001041 ttctcagtct ctcatctcac ctgatgagaa atactcacag gtgtggaggg gctggccccc ttcaATAAGg accagacgct 001120 001121 gtggctcatg cctataatcc cagcactttg ggaggctgag gtgggcggat cacctgaggt ccagagtttg agagcagcct 001200 001201 gaccaacatg gagaaacccc gtctctacta aaaatacaaa ataa |
Predicted Small Protein
Name | NONHSAT067581_smProtein_224:472 |
Length | 83 |
Molecular weight | 9125.1213 |
Aromaticity | 0.0365853658537 |
Instability index | 51.6573170732 |
Isoelectric point | 9.39642333984 |
Runs | 11 |
Runs residual | 0.00175535846268 |
Runs probability | 0.034751328869 |
Amino acid sequence | MLLICNPSRNPVLTETCAVLTQGLMDLGLCRLCFVKMCLQAVCLVKVIAILQSRVPWDRI HCGRPQGPLPKKAWVLSKVSLH |
Secondary structure | LEEEELLLLLLLLHHHHHHHHHHHHLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLE ELLLLLLLLLLLEEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiii iiiiiiiiiiiiiiiiiiiiii |