NONHSAT067590
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067590 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1060 nt |
Genomic location |
chr19-:53365060..53366119 |
Exon number |
1 |
Exons |
53365060..53366119 |
Genome context |
|
Sequence |
000001 ACAAGGCAAT TCATACTGGA GAGAAACCTT ACAAATGTAA AGAATGTGAC AACGTTTTCA GTTGCAGATC ACACCTTGCA 000080
000081 ATGCATAGGA GAATTCACAC TGGAGAAGCC ATACAAATGT AAGGTTTGTG AAAAGGTTTT TGGGCTCAAT TCACTCCTTG 000160 000161 CAGAACATAC TGAAATTCAC ACTGGAGAGA AACCTTACAA GTGTAATGAG TGTGGCAAAG CCTTTAGGGT GAGGGCATCG 000240 000241 CCTATTCACC ATCAAGCAAT CCATGGTATA GTGAAAGCTC ACAGATGTAA TGACTGCCAC AAAGTCTCCA GTAAAACTAC 000320 000321 AACACTTGCA AATCATTGGA GAACCTATAA TGAAGAGAGA TCTTACAAGT GTGATAAATG TGGCCAATTT TACAGTCATC 000400 000401 ATTCATACCT TGCAGTTCAT CAGTGAACTC ATACTGGAGA AAAACCTGTG ACAAAGTTTT CAGTCGTAAA TCACAGCTTG 000480 000481 AAAGACATAG GTGAATTCAT ACTGGAGAGA AACCATACAA ATGTAAGGTT TGTGATAAGG ATTTTGGGTG TGATTCACAC 000560 000561 CTTGCAGGAC ATACTAGAAT TCACCCTGGA GAGAAACCTT ACAAGTGTAA TGAGTGTGGC AAAGCCTTTA GTGGGCAATC 000640 000641 ACCACTTACT CACCATCCAT CAGGCAATCC ATGGTGTAGG GAAAGTTTAC TAATGCAATG ATTGTCACAA TGCCTTTGGT 000720 000721 AATGCTAGAA CTGTTGCAAA TCATTGGAGA ATCCGTAATG AAGAGAGATC TTACAAGTGT TAATAAATGT GGCAAAGTTT 000800 000801 TCAGACATCG TTCATAACTT GCAGTTCATC AGCGAACTCA TACTGGAGAG AAACCTTACA AATGTCATGA TTGAGGCAAG 000880 000881 GTCTTCAGTC AAGCTTCATC CTAGGCAAAA CATAGGAGAA TTCATACAGG AGAGAAACCT CACAGGTGTG ATAATTATGG 000960 000961 CAAAGTCTTT ACTTCACGTT CACAAGTCAT TAGGCATCAG AGAATCCCTA CTGGACAGAA ATCTTACAAA TGTCATAAGT 001040 001041 GTGACAAGGT TTCAGTCTGA |
Predicted Small Protein
Name | NONHSAT067590_smProtein_377:493 |
Length | 39 |
Molecular weight | 4589.2442 |
Aromaticity | 0.131578947368 |
Instability index | 60.4868421053 |
Isoelectric point | 10.051940918 |
Runs | 8 |
Runs residual | 0.0379155124654 |
Runs probability | 0.0283408408409 |
Amino acid sequence | MWPILQSSFIPCSSSVNSYWRKTCDKVFSRKSQLERHR |
Secondary structure | LLEEELLLLLLLLLLLLHHHHHHHHHHEELHHHHHLLL |
PRMN | - |
PiMo | - |