NONHSAT067604
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067604 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2370 nt |
Genomic location |
chr19-:53471883..53475747 |
Exon number |
2 |
Exons |
53471883..53474095,53475591..53475747 |
Genome context |
|
Sequence |
000001 gtatttttag tagagacggg gtttcaccgt gttaaccagg tctcgatctc ctgacctcgt gatctgcccg catcggcctc 000080
000081 ccaaagtgct gggattacag gcatgagcca ctgcgcctgg cAATGCTGTG TATTTTCTTG ACCTCATATA TCAGAAGCTA 000160 000161 TCTCTTCCAA ATGCATGACA AGGAAGTTCT CATCAAGAAG GCAAGGCAAT ACAGAAGTGT TCCACACAGG GACATTGCAA 000240 000241 AGACAAGCAA GTCATCACAC TGGAGATTTT TCCTTCCAGG AAATTGAGAA AGATTTTCAG GACTTTGAGT TTCAGTGGCA 000320 000321 AGAAGATGAA AGAAATGGCC ATGAAGCACT CATGACAGAG ATAAAAAAGT TGACAGGTAA TACAGACTGA TATGATCAAA 000400 000401 GGCATGCTGG AAACAAACCT ATTAAAGATC AGCTTGGATC AAGCTTTCAT TCACATCTGC CTGAACTGCA TATATTGCAG 000480 000481 AGCAAAGGGA AAATTGATAG TCAAGATGAG AAGTCTGTCA ATGATGCTTC CTCAGTTTCA GCATCCCAAA GAATTTCTTG 000560 000561 TATTCCTAAA ACCCATATTT CTAATAAGTA TGGGAATAAT TTCCTCCAGG AAGCACACAT GAGAGAAAAA TCTTTCCAAT 000640 000641 GTAATGAGAG TGGCAAAGCC TTTAATTGTA GCTCACTGTT AAAAAAATGT CAGATAATCC ATTTAGGAGA GAAAAAATAT 000720 000721 AAATGTGATA TATGTGGCAA GGTCTTTAAT CAGAAGCGAT ACCTTGCATA CCATCATAGA TGTCACACTG GTGAGAAACC 000800 000801 TTACAAGTGT AATCAGTGTG GCAAGACCTT CAGTTACAAG TCATCCCTTG TAATTCACAA GGCAATTCAT ACTGGAGAGA 000880 000881 AACCTCACAA GTGTAATGAA TGTGGCAAGG TTTTTAATCA AAAAGCATAT CTTGCAAGTC ATCATAGACT TCATACTGGA 000960 000961 GAGAAACCTT ACAAATGTGA AGAATGTGAC AAAGTTTTTA GTCGCTAATC ACACCTTGAA AGACATAGGA GAATTCATAC 001040 001041 TGGAGAGAAA CCGTACAAAT GTAAGGTTTG TGACAAGGCT TTCAGACGTG ATTCACACCT GGCACAACAT ATTGTAATTC 001120 001121 ACACTGGAGA GAAACCTTAC AAGTGTAATG AGTGTGGCAA GACCTTTGTT CAAAATTCAT CTCTTGTAAT GCATAAGGTC 001200 001201 ATTCATACTG GAGAGAAATG TTACAAGTGT AATGAATGTG GCAAGGTTTT TAATCACAAA TCAAACCTTG CATGTCATCA 001280 001281 TAGACTTCAT ACTGGAGAGA AACCTTACAA GTGTAATGAA TGTGGCAAGG TTTTTAATTG AAAATCAAAC CTTGAACATC 001360 001361 ATCATAGAGT TCATATCGGA GAAAAACCTT ACAAATGTGA AGAATGTGAC AAAGTTTTCA ATTTCAATTC ACGCCTTGAA 001440 001441 ATACATAGGA GAGTTCATAC TGGAGAGAAA CCATAGAAAT GTAAGGTTTG TGACAAGGCA TTCGGGTGTG ATTCACACCT 001520 001521 GGCACAACAT ACTAGAATTC ACACTGGAGA GAAACCGTGC AAGTGTGATG AGTGTGACAG AGCCTTCAGT GGTCAGTCAA 001600 001601 CACTTATTCA CCATCAAGCA ATCCATGTCA TAGGGAAACT TTACTAATGT AATGATTGTC ACAAAGTCCT CAGTAATGCT 001680 001681 ACAACCATTG CAAATTATTG GAGAATGCAT AATGAAGTGA GAACTTACAA GTGTTATAAA TGTGGCAAAT TTTTCAGACT 001760 001761 TCGTTCATAC CTTGCAGTTT ATCAGCGAAC TCATACTGGA GAGAAACCTT ACAAATGTGA TGATTGTGGC AAGGTCTTCA 001840 001841 GTCAAGCTTC ATCTTATGCA AAACACAGGT GAATTCATAC AAGAAAGAAA CCTCACAAGG GTGATGATTG TGTCAAAGCC 001920 001921 TTTATTTCAG GTTCATGCCT CATTACACAT CAGAGAATCC ATACTAGACA GAGATCTTAC AAAAGTCATA TGTGTGGCAA 002000 002001 GATCTTTAGT CTGAGGTCAC TCCTTGCAGG ACATCAGGAA ATTCATTTTT GAGGTAATAA TTTCAAATGC AATGAGTATA 002080 002081 GCAAACCATC AAGCACAATT GATGTTAGAT TCAAATCAGC ATTGAGTTCA GTTTGAGTTG ACTTAACATT GAGTTCAAGT 002160 002161 ATTTGTTGAG ATTAAAGTGT TTATGTTAAG AGGATTAggc caggtgcggt ggctcacacc tgtaatccca gcactttggg 002240 002241 aggccaagac aggtagatca cttgagatca ggagtttgag agcagcctgg ccaacagagg tgaGCACCTT TCCCAGTCtg 002320 002321 ttttttgttt cttcaacaaa aactgataga gatttttatg ggtattgtgt |
Predicted Small Protein
Name | NONHSAT067604_smProtein_122:286 |
Length | 55 |
Molecular weight | 6545.6221 |
Aromaticity | 0.148148148148 |
Instability index | 41.1851851852 |
Isoelectric point | 10.2164916992 |
Runs | 10 |
Runs residual | 0.0224932249322 |
Runs probability | 0.0310987458047 |
Amino acid sequence | MLCIFLTSYIRSYLFQMHDKEVLIKKARQYRSVPHRDIAKTSKSSHWRFFLPGN |
Secondary structure | LEEHHHHHHHHHHHHHHLLHHHHHHHHHHHLLLLHHHHHHLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |