NONHSAT068133
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068133 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1608 nt |
Genomic location |
chr19+:56905045..56910539 |
Exon number |
4 |
Exons |
56905045..56905422,56905586..56905810,56909250..56909417,56909646..56910539 |
Genome context |
|
Sequence |
000001 CGAGTCCCTG GGTTGCTTCC TGGGGTCTGT GGTGCTGGGT GTGCTATCTG CGTGTGATTC TCTAGCGAGA GATTGTGGGC 000080
000081 GAGTGACCGA GTGGGCAAGG GGCCGTCACT GTGTGTGCGT GATTTTGACA GTGTGTGGTG GTAGCTTCTG ACTCCGCGTG 000160 000161 GGTCGTTGAA TGTATGACTG GGACCGTTTA GCGGTGGATA CACAACTGTG TGCGGCTGTG GAAGATTGCC TCATCCGTTA 000240 000241 CGTTCCCATT TCCGTGGAAC AACAGTTTTA CCAGAAGGTT TCGAAGGAAC CTTAAAGTTT GGAAGCGTAA GAGTTTATCT 000320 000321 GGCGGCTTTG GTGTCATCAA ATGTGAGAAG CCCTGGACTT TACACATCCC GAGCCAGTGT GATCCAGTAT GATTGGGAGT 000400 000401 CCGAGTGCCA GATGCCGGTC AGGACCTGTT ATGCTGGGTC TCAGAATGCG GAAACTCTCC CTGTCCGAGG TGGAACAGTT 000480 000481 TGTCCTTGAG TGAGGACTGG AGTCCTGAGT GACTCTTTTG ATTTGATCCT GTTTCCCTCA AACCTGAGAT GGGAGCCTCA 000560 000561 CTGTATTGCC CAGGCTGGTC TTGAACTCCG GAGCTCAAGT GATCGTCTTG CTTCAGCCTT GCAAAATGAT GGTGAAGCTG 000640 000641 CATCATTGTC TGGGGTAAAT ACCTGAGGTT CGTTGTCTCA CGCCAAGGGA ATCAAGGACG TGGACACACA AGAAATGGAG 000720 000721 TCCCTGTCTG ACCGGGCCAT GTTGTATGTT CCTTGCTGTA CACGTGGTTG ACAAAGAAAA GGGAAGATGG AGCTGCGATG 000800 000801 TTGGACATGC CTGGCCCCCA GGTAGCTTTT TCCTATTGGC ACAGCTGCTG GCATTCACCC GTGCAAACTT CCAGCTTGCT 000880 000881 TATCTATGTC TGCAGCTTGA TTTTTCAGGC TGCTGTTTGT TAGAAAAGAA ATGACTTGGG GGCTGCTTTT CATTAAAAGG 000960 000961 AAAACCTTAC CGGGGATTTC CTTACCCTCA CTATCTGCCT AAATAATTTC TTTTTAACTC CTATGTCACT TGGGATTACA 001040 001041 GGCATGAGCC GCTGTGCCTG CTAGAGGGTT TTTTATCTTT ATTCCTCAAG ATTTTGCATT TAGATAATTA TGTTAAACTT 001120 001121 GGGTGTGCTA GGTAGACATA CGTCTGCTGA TTACCTGTTT AGGAAGAATG TGGATTCGTA CGTAGGGAAA AGGAGTCAGG 001200 001201 CTGGTGGGAC CAGGGGAAAG CAAAGAGATA AAGCAAATAA GCTATAGATC TGCATTTTCT TCATGGTCCA GGATATATAA 001280 001281 ACAAAAAAAG GAAGCAGATA AGCTATAGGC TTGCTTTTCT TTATGACCCA GGACATACAG CCCTGCCGAG CAAATAATGA 001360 001361 ACGTAACTCA CAAACTTCCT GCTTATCATC AAACGCACGC ATCCACTTAT CATCAAACAC CTCGGGTGAC AGAAGAATGC 001440 001441 AGGTCAGCTC CCTGCTGCCT TGGCATTATC AATCAGCCCA GGAACCATCC TATAAAATCT CCAGCAAGCC TTTGTTTCCT 001520 001521 TGCAGTCAGC TCCTCTTCCA CTGATTCTGC CTGTTGCTCC CTGATAACAT ACTTTGATAC TGTCTTTAAT AAATCTGCCT 001600 001601 TTCTTCAC |
Predicted Small Protein
Name | NONHSAT068133_smProtein_1322:1543 |
Length | 74 |
Molecular weight | 8310.213 |
Aromaticity | 0.0684931506849 |
Instability index | 67.4301369863 |
Isoelectric point | 9.05621337891 |
Runs | 12 |
Runs residual | 0.0202386212992 |
Runs probability | 0.0362568450804 |
Amino acid sequence | MTQDIQPCRANNERNSQTSCLSSNARIHLSSNTSGDRRMQVSSLLPWHYQSAQEPSYKIS SKPLFPCSQLLFH |
Secondary structure | LLLLLLLLLLLLLLLLLEEELLLLLEEEELLLLLLLEEEEHHHLLLHHHHLLLLLLEEEL LLLLLLLLLLLLL |
PRMN | - |
PiMo | - |