NONHSAT068135
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068135 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1276 nt |
Genomic location |
chr19+:56905045..56910539 |
Exon number |
4 |
Exons |
56905045..56905810,56909250..56909417,56909646..56909752,56910263..56910539 |
Genome context |
|
Sequence |
000001 TGCTGTTCGT GTGTTCGAGT CCCTGGGTTG CTTCCTGGGG TCTGTGGTGC TGGGTGTGCT ATCTGCGTGT GATTCTCTAG 000080
000081 CGAGAGATTG TGGGCGAGTG ACCGAGTGGG CAAGGGGCCG TCACTGTGTG TGCGTGATTT TGACAGTGTG TGGTGGTAGC 000160 000161 TTCTGACTCC GCGTGGGTCG TTGAATGTAT GACTGGGACC GTTTAGCGGT GGATACACAA CTGTGTGCGG CTGTGGAAGA 000240 000241 TTGCCTCATC CGTTACGTTC CCATTTCCGT GGAACAACAG TTTTACCAGA AGGTTTCGAA GGAACCTTAA AGTTTGGAAG 000320 000321 CGTAAGAGTT TATCTGGTAA CTAATTTTAA ACATTACATC TATGGTGAGT TAAATGTGGG TTATGAAGGA GAACGCAAAA 000400 000401 TAAAAACGTT ATAAAGATGT AAAGGAGTTT TATGGGGCGG CATCTCTTGG GCAAATATCA GACCGCCGTA GGTAGTTGTT 000480 000481 AATTCTCTCT TGTTTTTAGG CGGCTTTGGT GTCATCAAAT GTGAGAAGCC CTGGACTTTA CACATCCCGA GCCAGTGTGA 000560 000561 TCCAGTATGA TTGGGAGTCC GAGTGCCAGA TGCCGGTCAG GACCTGTTAT GCTGGGTCTC AGAATGCGGA AACTCTCCCT 000640 000641 GTCCGAGGTG GAACAGTTTG TCCTTGAGTG AGGACTGGAG TCCTGAGTGA CTCTTTTGAT TTGATCCTGT TTCCCTCAAA 000720 000721 CCTGAGATGG GAGCCTCACT GTATTGCCCA GGCTGGTCTT GAACTCCGGA GCTCAAGTGA TCGTCTTGCT TCAGCCTTGC 000800 000801 AAAATGATGG TGAAGCTGCA TCATTGTCTG GGGTAAATAC CTGAGGTTCG TTGTCTCACG CCAAGGGAAT CAAGGACGTG 000880 000881 GACACACAAG AAATGGAGTC CCTGTCTGAC CGGGCCATGT TGTATGTTCC TTGCTGTACA CGTGGTTGAC AAAGAAAAGG 000960 000961 GAAGATGGAG CTGCGATGTT GGACATGCCT GGCCCCCAGG ACATACAGCC CTGCCGAGCA AATAATGAAC GTAACTCACA 001040 001041 AACTTCCTGC TTATCATCAA ACGCACGCAT CCACTTATCA TCAAACACCT CGGGTGACAG AAGAATGCAG GTCAGCTCCC 001120 001121 TGCTGCCTTG GCATTATCAA TCAGCCCAGG AACCATCCTA TAAAATCTCC AGCAAGCCTT TGTTTCCTTG CAGTCAGCTC 001200 001201 CTCTTCCACT GATTCTGCCT GTTGCTCCCT GATAACATAC TTTGATACTG TCTTTAATAA ATCTGCCTTT CTTCAC |
Predicted Small Protein
Name | NONHSAT068135_smProtein_566:670 |
Length | 35 |
Molecular weight | 3778.4936 |
Aromaticity | 0.0294117647059 |
Instability index | 56.9441176471 |
Isoelectric point | 9.48931884766 |
Runs | 7 |
Runs residual | 0.0197319434103 |
Runs probability | 0.0371337724278 |
Amino acid sequence | MIGSPSARCRSGPVMLGLRMRKLSLSEVEQFVLE |
Secondary structure | LLLLLLLLLLLLLEELLLLEELLLHHHHHHHHHL |
PRMN | - |
PiMo | - |