NONHSAT068680
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068680 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
782 nt |
Genomic location |
chr2-:2837029..2842022 |
Exon number |
3 |
Exons |
2837029..2837620,2840691..2840778,2841921..2842022 |
Genome context |
|
Sequence |
000001 GGTCTAGCCA TTCAGTGAGT CAGCAGCACA GCTCCTCCAG CACGCAGAGA ACAGCGGTCC ATGGAGGGAG GGCGTGAGCC 000080
000081 TGGGGTTTTA CTGAGGAAGG ATAGTGGGTT TTTCAGTCCC TGAAGCTGCT GCTCTGCCCA CTCAGGAAGG TGAGGAAGGC 000160 000161 AGACGACAGC GTACATCCAG CCTCTGCTCt AGGAAAGGAG AGAAGAAAGA AGGAACAGAT TTAGTCCTGC CCAGAATCTG 000240 000241 CACTTCCACG GAGGACGCCA GGATATCACG GGAGAGACTG CAGCTCTGAT CAAATGGGGC GAGCTCTTGG CAGGAGCCAG 000320 000321 CATGTTCCTG TGTTCCATTT GGGAGGACAG TTTACTTTAA TGATGTACTT TGAAATCAGG TGGACGTCTG TAACTCCTGG 000400 000401 ACCTTTCGCA GCCTTTCCAG CCACGGTCAT CTCTGTGGAG TCAGGGGCAG GGACTTTGGG ATCAGCTTCT GCCCTTGTGA 000480 000481 AAACAGCAGA GCAGCCTGAG AGCCAGGAAG GACCTCACCT GAGTATCAGA TCACCTCATC Aggctgaatt gtgtggatct 000560 000561 agggatttta aagaggtgat taaggtaaaa tgaggttatt agggtggccc ttgacccagt gtgactggta tcctcataag 000640 000641 aggagattag gacacagcca cacagaggga cgaccacctg aggatccctg agaagatggc atctggaagg tgaggagaga 000720 000721 ggcctcagaa ggaatcaact ctgctgatac ttgatgccaa cttccagcct ctgaaactgc ga |
Predicted Small Protein
Name | NONHSAT068680_smProtein_293:592 |
Length | 100 |
Molecular weight | 10654.0769 |
Aromaticity | 0.0808080808081 |
Instability index | 51.9101010101 |
Isoelectric point | 7.98284912109 |
Runs | 16 |
Runs residual | 0.027926322044 |
Runs probability | 0.0403473326268 |
Amino acid sequence | MGRALGRSQHVPVFHLGGQFTLMMYFEIRWTSVTPGPFAAFPATVISVESGAGTLGSASA LVKTAEQPESQEGPHLSIRSPHQAELCGSRDFKEVIKVK |
Secondary structure | LLLLLLLLLLEEEEEELLEEEEEEEEEEEEEEELLLLLLLLLLEEEEEELLLLLHHHHHH HHHHLLLLLLLLLLEEEELLHHHHEELLLLLLEEEEEEL |
PRMN | - |
PiMo | - |