NONHSAT068731
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068731 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1329 nt |
Genomic location |
chr2+:3605976..3609340 |
Exon number |
3 |
Exons |
3605976..3606588,3607038..3607319,3608907..3609340 |
Genome context |
|
Sequence |
000001 TGAGGGCCGG GGCCTAGGGA GGGGCGGTGT CGTAGGGCGG AGCCCGGAGC TCGGCCCCTG ACGAGCCCGA ACTCGTCAAC 000080
000081 TTCCTGTCGG TACTTGAAGA AGCGGAGCCA GGGCTGAGAT CCCGAAGGCG GGCGAGGTCT GGGATGGGGC GGGGCCTATG 000160 000161 GGAGCGGGGC TGAAGCCCTG GGCCCGGCAG AGGAAGGTCG AGATGGACCA TGTTGGGCCC CTTCTCTCCC CGCCCCCAGG 000240 000241 CCGCAGTTCG GGGGCCACGC CCCGGCGTGC TCGGGTCACC GCGGGAAGCC CTTGAACCCC CTGGCGCCCG GCACCCACGT 000320 000321 GCGGTAACCG CGGCTCCTCG AGAGCTCCAG GGATGCGGAT CTACAGTAAG GGCTGTGGCC AGATGAATGA ATGCACATTT 000400 000401 TTTAGTGGGC AGAAAGATGT TAGAATTCAT GAATTAGAAT AAGCACAAAG GAGGGCGAGA GGGGAGGCCG TGGAAGCCGC 000480 000481 ATTCCTCCCC TTGCCTTGGG CGCCCACCCC CGAAGGGGCG CGTCCCCTCC CTGCTCCACT GCACGTGGGT GTTTAACCAG 000560 000561 GGGATATCCA GTGCCTCAAG CACCACGACC CGGGAGAAAA CTGAGTTGAG AAGGCCTTGG GGATGAAGGT GAGAAATTCG 000640 000641 AGAATCCCCG GAGATAACAC ATCAGCAAAT AGTGCGCAGG CAGAACAAGC TGTTGGAGGT GAGAGACACA GAGCAGAGAA 000720 000721 GCACCCGCAC CTGGAGAGTC AGGAGGGCCT CACATCAGAA CGCCTGAGCA AATACAGTTT TGAAGGATAC TAATTTTTTA 000800 000801 AAAAGTTCAT TCACATGAGT TAGACAAAGA GAAAGAAGCA GGACATTCTA GGAAGAAGGA ACGGCCCAGG CAAAAGCGAC 000880 000881 GCGTACATTG GCGTGGGTCC ATTCAAGAAT TGTGCCCACA ATATACCAGG CACTTGTCCA GACCTGCATC GTCCAATGCC 000960 000961 CACCTCGACC TCCCAAAGTG TTGGGATTAG AGGCGTGAGC CACCGCGCCC TGCCTGCATG TGGCTATTGA GATGTGCTGT 001040 001041 ATGATACACA CCGGACTTTG AAGACTCAGT GTGAAAAATA AAAAGAATTT TAAGAGGGGT GGGGGTCGAG GGGAGGCAGA 001120 001121 GCAGTAGGAC AAATAGCTAA TGCACGCAGG GCTTAAAACC TAGACAACAG GTTGATGGGT GCAGCAAACC ACCATGACAC 001200 001201 ATGTTTATCT ATATAGCACC TACATGTTCT GCACTTGTAT CCTGGAACTT AAAATTAGAA AAAAAAAATA ATAAAAGCCA 001280 001281 ACATGGCATT CATTACTGCC AAAAAAATTA AAACACATTG TTAATTTTG |
Predicted Small Protein
Name | NONHSAT068731_smProtein_209:385 |
Length | 59 |
Molecular weight | 6007.8763 |
Aromaticity | 0.0172413793103 |
Instability index | 45.7775862069 |
Isoelectric point | 11.9033813477 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0209915798151 |
Amino acid sequence | MLGPFSPRPQAAVRGPRPGVLGSPREALEPPGARHPRAVTAAPRELQGCGSTVRAVAR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLHHHHLLLLHHHHLLLLEEEEEEL |
PRMN | - |
PiMo | - |