NONHSAT068823
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068823 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1786 nt |
Genomic location |
chr2+:6072741..6110281 |
Exon number |
3 |
Exons |
6072741..6073053,6108718..6109370,6109462..6110281 |
Genome context |
|
Sequence |
000001 CTCCGAGCTT GGGGAAGAGA CAGTTAAACC TTCCCCGTGA GAGCGAGTTA TATCACGCAG CGCCAGTGCC AGGTCAGCAG 000080
000081 TCTGGCTGGA GCTGGACCGG CTGGTGGCGC CAGGCAGTGC CAAGCACCCC TGGCAGCCCT GCAGAGGGTT CTCAAATCCA 000160 000161 GATTTCATTC TGCAGTCCCG GCAGTGTTTT GACGACTGCC TCACTAAAGG AAGCTAAAAG CTGTGCTGAT GCCTCCCAGA 000240 000241 CGAGCCTCGT TGGAAGCACA GAACCTTCAC GGCTCGGAGC CGCTGACACC GTGACAAAGG GAGCCCTGCT CAGGAGAAAG 000320 000321 AGCAAATGAG AGGCAGTTGC ACTTTTTCAG GTGTCAGGCT GGAGGAAGCC ACTTGAAGAT GAATCTACCT CTGCCTTAGG 000400 000401 ATTGCCTGAT GGCCTGTGCC ATTCCATGTT ATATCTACTG ATTTGCTCCC TGTATTCAAA GATTTTTTTT TTTTACTTAA 000480 000481 TTCTCTCTTA CTGACCCTGA GAGTGACCAT ATTTTTAACC AATTTGGTCT TCAGCCTCAA AACTTAGCTC TTTCCTTTTG 000560 000561 TGGTCCCCGA ATCCTATCAC GTGTCATGGT GGCTGTGAAG ATGTTTGCCA AGCCTGCTGA GAAGGCTCAT CTGTGGCATC 000640 000641 CAAAAGCAGA GATTTCAACT CTGGACCCCT GTGACCTGCC TTTGTAATTA TGGATACCCA GCACTGTTTT GAAATATCAG 000720 000721 TGGACATCCA GTTTTTAAAA GCCCTCAGAG CTTTGGGAGA CACCCCTTTA TCTCTCTGGC ATGTCAGAGA ACCGATTCAA 000800 000801 CCCTTCTCAT CTCCTCCTCC TTCCCTCTCT TGGGCCATCA GGATGCGGCA GCAACTCACT GTGCATGTTT TTACAGCTCT 000880 000881 TCTCCAGTAA TGCTGCCATT TCCACTGCAG ACCACAGGAT AAAAGGACCG CTTCACCGTG GCCCAGGATA CCCTTTTAAG 000960 000961 TAGGAGAGGG AGAAGAAAGT ACTGCTTTGA TCTAAAATTA AGCAAACGTT CTTCAATAAA CCCACCATGA GACTTGACCA 001040 001041 CTAATGGTGA CCAGCAGTGG CTTTGTCATG GCCCTGCCCA CTGGGGGCAG GCACATGCCG GGGCCAGGGC AGGCTGCCAG 001120 001121 CTGGTGAGCA CGAATAGGTG GCTGGTGGAG CGCATGCAGT GGGAAGGGCA GATGGCTCCA TTTTGATTTG TTAGCAGGCC 001200 001201 ACTTCCTCGG AAGGGGCTTT CCCTTCAGTG GGGTCTGCAC CGCCAGCCTC AGCTGTCTTG GAGCAGATGT GTATAGTTAG 001280 001281 AGATGGGGAC CTTTTCACTG TAAATACTGC TCACATGTTC CTAGGCTGAC TTTACTATGT GCAGAGCCTC TTCTCAAATA 001360 001361 TCCAAATCCC CTCTGTTGGG TACTACAGAA CAGATGTTAC CCTGCCTCCT ATTACATTAA TTTACGAACT TTACATATGC 001440 001441 TGAGTTACGG ACCCTAAGCT GTTGCATGTG CTTGGCTCTT ATGTTCCAAA AAGTACATTT GTATGGTTTT GTGGAAACTG 001520 001521 TGCTGTTCTG CTTTTGCAGT CTGTGAGATT CTGATTTTTT TTTTCTCATC AGCAATTATC CTTGTCTTGG AACATCAGAG 001600 001601 CTTGAAGAAA GGGATTCTAG CAGCCCACCT CTCTCCTTCC TAATCCAGAT GGTTAGAGGC TTAGAGAGAG GTGGTGGTTG 001680 001681 CTCTGAGTTT ACCAGATTCA GTGACAAACC CCTTCTAATT TCTAATCAAT CTGGCAGCCT TCATTTACCA AAAGTTGACT 001760 001761 TTTGATAGTA TAACTTTTAT ACACCG |
Predicted Small Protein
Name | NONHSAT068823_smProtein_689:889 |
Length | 67 |
Molecular weight | 7599.7699 |
Aromaticity | 0.0909090909091 |
Instability index | 46.8984848485 |
Isoelectric point | 6.81109619141 |
Runs | 8 |
Runs residual | 0.0293957539467 |
Runs probability | 0.0469881646353 |
Amino acid sequence | MDTQHCFEISVDIQFLKALRALGDTPLSLWHVREPIQPFSSPPPSLSWAIRMRQQLTVHV FTALLQ |
Secondary structure | LLLLLEEEEEEHHHHHHHHHHHLLLLLLHHHLLLLLLLLLLLLLLHHHHHHHHHHHHHHH HHHHHL |
PRMN | - |
PiMo | - |