NONHSAT068916
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068916 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1294 nt |
Genomic location |
chr2-:6960200..6980496 |
Exon number |
3 |
Exons |
6960200..6961279,6970099..6970237,6980422..6980496 |
Genome context |
|
Sequence |
000001 agggagattt tgattatcca tgggattcca ttcataacct cataaaccac ccccacgaag aaattatata tctcgGTGAC 000080
000081 ATGGTTTTCT GGTGCCTTGG CAACTGCTCA CGATGCATGG GAAGACTAAA CACTTTGTGT ACAGCATTCT GTCTCATCCA 000160 000161 GTGAAGACTT CCTCTGGATT ATTGCAGCAG ACACCTCTAA CCTCCTTAAT CTGTATGAGA GCACCCACGC TTCCTCCAAC 000240 000241 TCCTGCCGCA GAGCTGCGTT TCCTCAGTAC TGCTGTCCGC TTCCAGCCCC GCTCCGACGC ATCTGACGTC ATTTCCTCGT 000320 000321 CTTGTCTCTG GACCTGGTTC TCCCAAGGCC TCAGTCCCTG TGTCCATGGT CCCTCTGTTC CTGGGCTCCC TGGAGTCCAT 000400 000401 TGGGAATCCG AGTCCTCGCC TTCCCATCAT CTGCCTCTGG AATGACCCTT GGGTTTGTCT TTCGCTCTCT CTCCGTTCTG 000480 000481 CCACCTTCCC GGTGCTTTAA TCAGGCATCA GTCTTGTAGC TGTAGCCAGG ACCCACCAAG CCACTCCATT CTCTTCTCAG 000560 000561 CTCCCGGAGt gtgatggtta atattgactg tcagcttgat gaaattgaag gatgcaaagt attgttcctg gtgtgactgt 000640 000641 gagggtgttg ccaaaggaga ttcacatttg agtcagtggg ctgggagagg cagacccacc ctcaatctgg gtgggcacca 000720 000721 tctaatcagc tgccagcatg gctggaataa aagcaggcag aagaacatgg aaagactaga ctggcttagt cttttggcct 000800 000801 ccatctttct cccgtggctt ccgtgctcct cagcttgcag atgacctgct gtgggacctc atcttgtgat cgtgtgagtc 000880 000881 aattctcctt aataaactcc cctttataca taaatctatc ctattagttc tgtccctcta gagaaccctg actagtacaC 000960 000961 AGAGCAATCC TGGAAATAGC CTCACTGCCT CACCACTCCC CCTGGGAGAC TTTTCTTTAC TTCCCTCTTT GACTTGCACT 001040 001041 CTCCCCACTG GGCCAAGCAG GCTTCCCACT ACCGGGGCTC CTGTGCTACC CCAGGGACAC TCAGGGTCTC ACCCCTTAAG 001120 001121 CCCGTGCCTC TCATTGTCCC TGCTCATCCC CACCTGGGCT GCCCAGCTTC TCCCACTCCT GCCTCGTGTT CTTTCAAATC 001200 001201 CCTGATCAAG TTTGGCTTCT GAAATGGACC CTTCTTCAGT CCCCTGGGCC CACTCAGCCT TCCTTCCTCC CGGTGTTCAG 001280 001281 GGGACTGAAT TAGC |
Predicted Small Protein
Name | NONHSAT068916_smProtein_365:499 |
Length | 45 |
Molecular weight | 4853.7661 |
Aromaticity | 0.0909090909091 |
Instability index | 73.25 |
Isoelectric point | 5.81878662109 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0987710399474 |
Amino acid sequence | MVPLFLGSLESIGNPSPRLPIICLWNDPWVCLSLSLRSATFPVL |
Secondary structure | LLLLLLLLHHHLLLLLLLLLEEEEELLLEEEEEEELLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo |