NONHSAT069138
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069138 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
856 nt |
Genomic location |
chr2+:11242268..11243123 |
Exon number |
1 |
Exons |
11242268..11243123 |
Genome context |
|
Sequence |
000001 ATGGCAGGTG AAAAAGTTGA GAAGCCGGAT ACTAAAGAGA AGAAACCTGA AGCAAAGAAG GCTGATGCTG GTGGCAAGGT 000080
000081 GAAAAGGCAT CACCTCAAGA CTGAAAAACT CAAGAAGGGG AAGCCCCATT GCAGCCTCAA TCCCGTCCTT GTCAGAGGAG 000160 000161 TTGGCAGGTA TTCCCAACCT GCCATGTATT CCAGAAAGGC CACGTGGAAG AGGAAGTACT TAGCTGCGAA GTCCAAGGTT 000240 000241 GAAAAGAAAA AGGAGAAGGT TCTTGCAACT GTTACAAACC AGTTGGTGGT GACAAGAACG GTGGTCCTGG GTGGTTAACA 000320 000321 AAATGCCTAG ATATTACCCT ACCGGAGATG CGCCTCGAAA GCTGTTGAGC CACGGCAAAA AAACTTTCAG TCAGCACGTG 000400 000401 AGAAAACTGT GAGCCAGCAT TACCCCCGAA GCCATTCTAA TCATCTTCAC TGGATGCCAC AGAGGCAAGA GGGTGGTTTT 000480 000481 CTTGAAGCAG CTGGCTAGCG GCTTGGTATT TAGGACTGGA CCTCTGGTCC TCAATCGAGT TCCTCTATGA AGAACACACC 000560 000561 AGACATTTGT CATTGCCACC TCAACCAAAA CTGACATCAG CAATGTAAAA ATCCCAAAAC ATCTCACTGA TGCTTGCTTC 000640 000641 AAGAAGCAGC AGCTGCGGAA GCCCAGACAC CAGGAAGGTG AGATCTTCGA CACAGAAAAA GAGAAATACG AGATCACAGG 000720 000721 GCAGCGCAAG ATTGATCAGA AAGCTGTGGA CTCACAGATT TTACCAAAAA TCAAAGTTAT TCCTTAGCTC CAGGGCTACC 000800 000801 TGAGATCTGT GTTTGTTCTG AGGAATGGAA TTTATCCTCA CAAATTGGTG TTCTAA |
Predicted Small Protein
Name | NONHSAT069138_smProtein_629:802 |
Length | 58 |
Molecular weight | 6574.4821 |
Aromaticity | 0.0701754385965 |
Instability index | 73.9124561404 |
Isoelectric point | 12.1077270508 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0313328033917 |
Amino acid sequence | MLASRSSSCGSPDTRKVRSSTQKKRNTRSQGSARLIRKLWTHRFYQKSKLFLSSRAT |
Secondary structure | LLLLLLLLLLLLLLLEELLLLLLLLLLLLLLHHHHHHHHHHHHHEEELLEEEEELLL |
PRMN | - |
PiMo | - |