NONHSAT069465
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069465 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1429 nt |
Genomic location |
chr2+:20877569..20879005 |
Exon number |
1 |
Exons |
20877569..20879005 |
Genome context |
|
Sequence |
000001 GGGCAGCCCA TGCCTGGATT TTTTGGTGAA TGAGTCTGAA AAGCAGTGAC CAGGTGTGTT GAGGGCCTCC CCTTGCCTGC 000080
000081 ACCTTTTTAT CTCTGAGTGA CTGAGGGCTG CCAAGGCCAG ACAACGCACA TGTGTCCTGG ATCCTCCCCT GGCCTGGGGC 000160 000161 AGCAGCAGCA GCAGCAGCTG GGCTTGGGGT GAGTAGGCTG GCTTGAGGAA GGGGCTGCCC ACAAGCAGGG CTCATTTCCT 000240 000241 GGGTCAGGGC CTGTCAGACT CAAAGTCAGC TCTTCAGCAT TCTGTTTAGA AAATGATGAT GCAGTTCAGT GAGAAAGAAA 000320 000321 GCTCAGGATA AAATATGTTT TCTGGAGGGG AAATACTCAA GTGTTCTAAG CCAGGAACAG AGACTCTCAA GAGAGGAATT 000400 000401 CTCTGGCATT CTCTGCCTTG GATAAATCAT GGATTAAACA TGAGCATCCT TAGAATAATT TTATTTTTGT ATTTCACTTT 000480 000481 ACACTGTAAT GCAAACAGCT TTTATGTTTT CTTTGACGAA GAATCATAAT TGAGTCACTT TAGGTCTTTT AGCTGGAAGC 000560 000561 ATTTCACCCT AAATGAAAAG TTAATGCATT TTTTACAAGG ATTAACATGC TAACTACAAC TTGCCTTTCA GCAGATGACA 000640 000641 ATAAGGGATT CTGAAAAGTT TGGACTGTCT TTTTCTTTTT GTATACAAAT AAAGCAGCAG ATCCTTTCTC TGTGAAGGTT 000720 000721 GTTGCAGAGC TCCCGTACCA GCTTATAAAA TGCGGCTGTT TAAGCAGGAC TTGGGTGGGC AGCAGAATTC TGCACATGAC 000800 000801 GAGTGGCTGC AGCTTAGAAA GCAAATTTCA CCTGATTCCA GTACTGTGAT TTTAAGGGAA ACGGTAAAAC TCAAAGTGCC 000880 000881 AGTAATGCCA TCAAGGCTCA GTAACATGCC ATTTCCTCAG CAGCTAAAGA CAAAAAGAAT TATTTTGGTG AGGGGATAGA 000960 000961 AATCCTTTCG CTTTGCAGTG ACACCCACTT TTTCTTAGCT TGGCTTGGGA GTAAGGAGAT TGGAGTGTGG GGGGACATTA 001040 001041 GAAACTCATT TAAGGCAAAC TGAAATCTCC TTCATCAGCA GTCTTCCTGC TGGTGTAGCC ACAGCAGAAC TCCGAGGCTT 001120 001121 GCAGGCTGGG CTGTCTCCTT GCTGCCTGGC CTGGGTGTTT ATTTGGGCAA TGCAAGCTGA CATTGTGAGG TGTTGCCGAT 001200 001201 GCCCAGGCCA GCTAGCAGGG AGCCCTCCCA GGGCTGGGAG AAACCTATGT GCATATATAT TCTCCCATTT AAATAGATTG 001280 001281 TACATAGTGG GATGTAAATG ACATGTGAAA CAGCAATCTC TATTTTTCTT AACTATTATA TAGCAGTATA TATTTGTTGT 001360 001361 GCATGCTTGT ATACTCTTCA TTAACCATTT TAATATTTTG TACAGAGAAG GTGAGTAAAT ATTTTATTC |
Predicted Small Protein
Name | NONHSAT069465_smProtein_749:958 |
Length | 70 |
Molecular weight | 7984.335 |
Aromaticity | 0.0434782608696 |
Instability index | 79.1565217391 |
Isoelectric point | 11.0000610352 |
Runs | 9 |
Runs residual | 0.0088965418281 |
Runs probability | 0.0488135194017 |
Amino acid sequence | MRLFKQDLGGQQNSAHDEWLQLRKQISPDSSTVILRETVKLKVPVMPSRLSNMPFPQQLK TKRIILVRG |
Secondary structure | LLEEELLLLLLLLLHHHHHHHHHHHLLLLLLEEEEEEEEEEEEEELLLLLLLLLLLLLLL LLEEEEEEL |
PRMN | - |
PiMo | - |