NONHSAT069523
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069523 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
506 nt |
Genomic location |
chr2-:23106980..23275432 |
Exon number |
4 |
Exons |
23106980..23107037,23154196..23154293,23167123..23167224,23275185..23275432 |
Genome context |
|
Sequence |
000001 TCCTGAGCAT TTTCCATTAG CTAGAATGAT GGATGACTGG GGCTGTTTGG GGCAGGGACT GAAGTGTAGA GGAGGTGGTG 000080
000081 TCTTGGGGCA TAGAGGAGAG AGCTCACAGA TTCCATCCAG GCCTGGACCT GTTCCTTGCA TTGGGTTTGA AGGAATCAGA 000160 000161 GCAATTTCTT GTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTATCAGTGG AATAAGCAAG CCTTTCTCTT 000240 000241 AAGACTTTTG ACTTGGGGTT GGTGCCAGAG CCTGTGGAGC CGGAGCTGTT CATAGGTTTC CTGATAGGAG CTGGCAGACG 000320 000321 TTGCCTGGGT AGGGGTAGAA CTAGATGACC GCCCCGGCTG GTCTCGAACT CCTGACATCA TGTAATCCGC CTGCCTCGGC 000400 000401 CTCCCAAAGT GCTGGGATTA CAGGCGTGAG CCTTTGTATC TGGCCCCAGT CTCACTTGTA AGTGAGAGCT AAACACTGAG 000480 000481 TACACATGGA CATAAACATG GGAGCA |
Predicted Small Protein
Name | NONHSAT069523_smProtein_344:460 |
Length | 39 |
Molecular weight | 3810.3352 |
Aromaticity | 0.0263157894737 |
Instability index | 65.8684210526 |
Isoelectric point | 5.22210693359 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0322233998705 |
Amino acid sequence | MTAPAGLELLTSCNPPASASQSAGITGVSLCIWPQSHL |
Secondary structure | LLLHHHHEELLLLLLLLLLLLLLLLLLEEEEEELLLLL |
PRMN | - |
PiMo | - |