NONHSAT069526
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069526 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
831 nt |
Genomic location |
chr2-:23243154..23421793 |
Exon number |
5 |
Exons |
23243154..23243264,23248693..23248821,23250590..23250809,23313618..23313874,23421680..23421793 |
Genome context |
|
Sequence |
000001 TGGGAGACTC AAAACCCTGT TCAACTCTCT CTGGGCTAGC TGCTCCCCTC CCCAAGAGGA TTTCTCTCCA GAGCTGGTAT 000080
000081 CATCGCTTAA TGATGTTCCA CCAACAAGGG GAAGATTCAG CCATGTCTTC CTAGGATCCA GCATCCAAAC CTGGACCAAA 000160 000161 GTCCTCGGAT CCTCAGCAAT GGGGGTGCAT CTGGTGATGG TGTTCATGCT AAATTTGTGC CAAGAGACAC CTGTACTTGT 000240 000241 GGGAGAATTA ATATTTCACT TCTGTTTAGG TTTCTTTTCT GGGAGCTGCT ATCACTGAAT ACATAAAGAA ATTGAGCCTA 000320 000321 TATGATTTCA ATCTTCACCT TCTGATGCTG ATGAAACAGG ATTCTATGCA GAGAAAATCC TCTCCAGTCA AGTAATTGCA 000400 000401 TCCATTTCAT CTTCCCAGCC CTCCTCTAGA TGGGAGGTGG AGGTGTGTGT ACCAATCTCT TAATTCAGAA ATGAGACAAG 000480 000481 AGGAGGAAAA AGGAGTTCCG GAGGTGTGTG ATCCAAGTCT GGCTGCAGGC TATGGACATT CCAGGAGGGA GACTCCATCA 000560 000561 GAGAAGTGGA GCTGGAGTTG GGTGTTAGAG GGACAGTGGG GACCCCAGCC AGAGCCTGGG GACTTGGCTG CCTTGGAACC 000640 000641 AGAACCTGGC CCCTCAGAGG AGTTGCAGAA TTTCGATAGA GGAGTGGCAG GAGGTGTACT GGCTGAAGAG GAGGCCCAAG 000720 000721 gaactccttt tcatacatca aaactgagct tatcacctct accctgaagt catcctggac atcactggtc ccagttaatc 000800 000801 actcacttat ctttgccatc cttgacctgg t |
Predicted Small Protein
Name | NONHSAT069526_smProtein_470:766 |
Length | 99 |
Molecular weight | 10666.5465 |
Aromaticity | 0.0714285714286 |
Instability index | 70.4704081633 |
Isoelectric point | 4.39300537109 |
Runs | 14 |
Runs residual | 0.00381460995613 |
Runs probability | 0.0372662578544 |
Amino acid sequence | MRQEEEKGVPEVCDPSLAAGYGHSRRETPSEKWSWSWVLEGQWGPQPEPGDLAALEPEPG PSEELQNFDRGVAGGVLAEEEAQGTPFHTSKLSLSPLP |
Secondary structure | LLHHHHLLLLEELLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLLLLLLEELLLLLL LLHHHHLLLLLLLLLEEEHHHLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |