NONHSAT069557
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069557 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
825 nt |
Genomic location |
chr2+:24298887..24303974 |
Exon number |
2 |
Exons |
24298887..24299485,24303749..24303974 |
Genome context |
|
Sequence |
000001 CAGAAATGTG GCTCAAGGAG CATATCTCTG AGGATGGGGC CGGATAGTGT CTTCGCTGAC AGGATAGGAA TTCTGGAGTT 000080
000081 CTCCGCTCTG GGGACGGAGG AGGAGCAAGA ATGCTCCGAT CCACGCCGCT AAGAAAGTCA AACCCGAAGT TCTCCCACCC 000160 000161 TCCGCAGAAC ACCCGATACT CACGTTCGCC CTCTTGGCCG CTTGCATCGC CATCTTGGCG GGCTGATGAA GTTACCGTAG 000240 000241 CAGATACTGA AATTCCTCCG GAGCTCGCTC GGCTTCGGGG GTTACACCGC GTTAGATGCA GGACATCAAC ATCCAGGACC 000320 000321 CGCCGGAAGC TGTTACAGCG GAATAGCGCC GTCTTACGCT GAGACGCGCT GACGTAGCAG CCCCCTTCGA ATAGACTCCG 000400 000401 GGGTAAAACC GAGCCTGAGC GAGACTCGAG GCCGGAAGAT GGAAAGGCGA GAGTCCAAGA CACTTCCGGG CTCTGTACCG 000480 000481 TAAAGGGCGG GGCGTAGCCT CCAAAAGGCG AGATGTTCCG GTCGGGGAGG CCCTGAGCAG AGGAACCCGG GTGGAGAGGG 000560 000561 CGGGGCCTGA GGAGGGCGGA GAGCTGGGGC GGGTCTCAGC TGCTCCAAGC TTTTCTGCCA TTTGAAGCTT CTTCTGGGAG 000640 000641 CCAGCTGTGA CCAGAGGAAT AGCTCCAGCC ATCCGGGTGA GTTGGATAGC AGCTGTGCCC ACACCACTCA GTCCTGCATG 000720 000721 GATTAGCACA TAGTCTCCAG CCTGAACATT TCCTGTGACA GAAAGTACAG GGTTCTCTTT ACTTTGCAAC TGCTACACAT 000800 000801 TCCCCACACA GGCATATTCT ATCAA |
Predicted Small Protein
Name | NONHSAT069557_smProtein_110:361 |
Length | 84 |
Molecular weight | 9632.9402 |
Aromaticity | 0.0481927710843 |
Instability index | 65.7337349398 |
Isoelectric point | 11.9473266602 |
Runs | 9 |
Runs residual | 0.031593038822 |
Runs probability | 0.032709179768 |
Amino acid sequence | MLRSTPLRKSNPKFSHPPQNTRYSRSPSWPLASPSWRADEVTVADTEIPPELARLRGLHR VRCRTSTSRTRRKLLQRNSAVLR |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLHHHHHHLLLLE EEELLLLHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |