NONHSAT069640
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069640 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1984 nt |
Genomic location |
chr2+:25380063..25382006 |
Exon number |
1 |
Exons |
25380063..25382006 |
Genome context |
|
Sequence |
000001 TGAAGAACTG GTCATTTTTT TTGAGTGCCC TCTTCTCAGT TTTGTTTAAA CTTACACTCA GTAGAGTGTT GGGTTGTCTG 000080
000081 CTGACATGGA GTAGAACCTG GATTCTGGCC AAATAGGCCA GAATCGGAAA GGTGAAGGTG AGTGTGATAG TAGGTAATCT 000160 000161 CCTCACCCCA GCACAGGCCC TGGGAGAGAG GCAAAGCAGT TTGATGGGAT CTGGAGGGGA GGGAGGTACC CTGGCCCTTG 000240 000241 GTCTAGCATC AGTGAGTCCT GCCCTTCCAA GCCCCTGGAG GCTAGTGGCA TTGCATTGTG CCCCTTTTTG CCACCCTTCT 000320 000321 CTGATGTGAT TTTGAGCGAA GAGGAGTCAG TAAGCCCATT GAGACCGGCT GCTCCCAAAG CCCGAGGACT CTAGCTGTGT 000400 000401 GGGGAAGGGC TAGCATTGGT CAGGACTCTG CTGACAGCAC TGAGTAGGCA GGAATGTATT TGAGATTTGG AAGTACTGTT 000480 000481 AATTTGGTGG AGTCAGGTGA ATGGATAAGA GGCAGATCGG CAGAAAGCAT CAGTGTGGTC CCGAGGCTCC CTCTGTTTTC 000560 000561 CTTGCCATGG AGTCCCCAGC GCCTTGTGCC TGTTTCCATT TCCCTCTCTC TTTGAAAAGT AGAAATCAGT GGTTTCTTGA 000640 000641 CTCCTAAACA GCCTCCTCAC TATAGAAGGA GCCTGAGCAG GTCAGAAGAA CTAGAAAAGT CCTCAGATAC CCCCCTCTGT 000720 000721 CCAGCCCCCT TTCCCATACA CAGATATCAA TGGATGAGCA GGAAAAGAGG AGGCCTGGAC TCACTGAAGT ACTTGAAGAA 000800 000801 GCACAAGTGT CATAGATGTG CCGCCCTTTG CCCTGGGTGT TCTAGATCAC ACAGAACACG TTTCAGCTGG ACTAAGAATC 000880 000881 AGACTAGCCA GGGGTTCTTC TGAACAGCTC AGGCCAGACC TCTGGGCTCC TCTGGGGGCC CTGGGACATG ATGCCTTGCA 000960 000961 GTTTCCATTC CATTGTCCCC AGGCCTCCTG ACCTGGTGAC AGAGAGTGCC CTGCAGAAGT GAGTCTATTT TTCCCAATTC 001040 001041 CTCTTCATGA CCAGAAAATG GCAGCTGGCC GGTTGGGGTC CTGTGGGAAA GGGCTAACCT GGGCTGTTAG GTAGACACTA 001120 001121 GGTTTAAAGG TAGACAGGGA GATGGCATCA TCAGGGCAGG CCAGGCCCAC TTCCTGTGAC CCCAGACCTT GGCAGGCGGG 001200 001201 TCGTGCTGAA ACCAGGCATC TCCCTCACAC CTGGGGAAAG GTTTAGGGCA ACATGTTGCC TCTTCATCCC ATTAACCCTA 001280 001281 GAAATCTTCT GGTTAGAGTG GCCCCTTACC CCAAATCTGG CCTAGGTCTG AAGACTGCAG GATAGTCATG ATGGGCCCAT 001360 001361 CCTAGAGCCT GGCTAGCTGG AAGACGCGGT ATGGCAGGGA CAGGAGGGCG GCAGGAAGGG CTTTGTGGCC CTGCTGGGGC 001440 001441 CAAAGGCAGT TTTCTGTGCT CCCTTTAGCC CCAGCCTGGC TGGCCAGGTC TCCTGTACTT CAGGGGACCA TGGGGCCGCC 001520 001521 CAAGCCAGTC ACCTTCCCCT TCCAAGCTCT CCCCCCATGA CTGTTGATTT CTGGCGCGTG GAGGCAGAGT TGTGAATCCA 001600 001601 CAAATGCTGT AGCCCATATC TCGTAATGTG TCTGTGTCCA CTTAGAGCCT CACGACCTGG CTGTGTGTGT GCATGTGTGT 001680 001681 GTAGTATAGT TTGTAGTTGA CAATATGTGT ATATAATAGC TGGTGTATTT ATATGTGAGT GCAGAATTAG TGCCCGTGGC 001760 001761 GGTTTTCTGT ATTTTAAACC CATTGAATTG GTTAGTTTTA TTTTAGGGAA GTGGGAAAGG CGGAGTGGGG GGAAGTATAG 001840 001841 GAAGAAGGAT TCTTAGCAAA ATCATTCTCT AGGACTATTA GTCGCGATCT CCCAGTGAGC CATCACGATG CCCTTTTCAA 001920 001921 ATAAATGTTA ATGTTGTCAC CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAA |
Predicted Small Protein
Name | NONHSAT069640_smProtein_500:646 |
Length | 49 |
Molecular weight | 5463.2824 |
Aromaticity | 0.104166666667 |
Instability index | 66.7854166667 |
Isoelectric point | 8.63360595703 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0283715087636 |
Amino acid sequence | MDKRQIGRKHQCGPEAPSVFLAMESPAPCACFHFPLSLKSRNQWFLDS |
Secondary structure | LLHHHLLLLLLLLLLLLLLEELLLLLLLLLLEEELLLLLLLLLEEELL |
PRMN | - |
PiMo | - |