NONHSAT069809
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069809 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
616 nt |
Genomic location |
chr2+:28113630..28117935 |
Exon number |
2 |
Exons |
28113630..28113709,28117400..28117935 |
Genome context |
|
Sequence |
000001 AGGTCGGTGC GTCTGTCGGG GGCGCGCTCG GGTACCTGTA CCCCACGTAG TCGCCGGTTA CCGATCGGAC TAAGTTCCAG 000080
000081 TGGTGATTTA CAAGTCAAGT TAAAATGTCC CCAGAAGTGG CCTTGAACCG AATATCTCCA ATGCTCTCCC CTTTCATATC 000160 000161 TAGCGTGGTC CGGAATGGAA AAGTGGGACT GGATGCTACA AACTGTTTGA GGATAACTGA CTTAAAATCT GGGTATGTAC 000240 000241 CAGAATGAAT TCAGTCAATG TACCAGAACC AATTCAACCT TTACCTAATG ACAGCCCTTC CTTACCAGAC TCATAAAAAT 000320 000321 TGACTGCCAC AGAAACCCAC CAAGTCATCA TCTCATCATA TGTTGATTCA GTTGGTTTTG TTCAGTTCTT GACATTTTAT 000400 000401 GTTTCAGGTT ATTTTATTTG TGTTGTGGAC CATTGTTTTA TGACTAGAAT GTTCATGTCT TTTTTTCTGT TTTTTCTTTG 000480 000481 TGAAGAGCAT GCCGTCAGAG TTTTAAAAGT GTGTTTTTCA TTCATTGGCT TGTTTTCTTA TTGTGTTTGC TGCAGTCCAG 000560 000561 CAACAAACAT ATTCTGAATC TGATACCATT TGGTAAACTC TCTTAATGTG AATATT |
Predicted Small Protein
Name | NONHSAT069809_smProtein_104:247 |
Length | 48 |
Molecular weight | 5076.8674 |
Aromaticity | 0.0425531914894 |
Instability index | 60.0489361702 |
Isoelectric point | 7.93609619141 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.0375571650082 |
Amino acid sequence | MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGYVPE |
Secondary structure | LLHHHHHLLLLLLLLLLLLEEEELLEEEELLLLEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |