NONHSAT070045

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT070045

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3311 nt

Genomic location

chr2+:34935518..34950118

Exon number

3

Exons

34935518..34935580,34938646..34938840,34947066..34950118

Genome context

Sequence
000001 ggactgtgaa tgcagcccgt gaaaaagagg gttttcggaa gcttgacatt tatgagggtg aggaattgac aagccgacat 000080
000081 cagtctccag agtgaatcca aggagtggac ccaagacatt tgtgttctgt gatgtggtgg catgttacct gtcatctccg 000160
000161 atgcataact cctaaagtgc gtctggggca gttgtacaga ttgcagagga taatactcaa gatgttctcc aaggccaact 000240
000241 agtcatcagt ttattcatGT TTCTGGGATT GGATTCATGA ACTCATCCTT TGAACTATTT CAACAAGCTT TTTCATGTAA 000320
000321 CTAATCTGCG GAAGGTAGAA AGGGGAAAAC TGTTGGGTGC TAAAATGACA ACTGGTTCAA GGTACAATGG CGAATATTTT 000400
000401 TATTTCTGCA ACTTTTCTTA GAGGTTGGAA ACTGGACTGG GCAGGAAGAT TCCTTTTTGT AAGATTAGTC TCCAGTTTTC 000480
000481 ATCAAGCAGT TTAGTGGGGT ATTTTAGGCC CAGTTCCCTC TCCACAGTCC CCAAAGGTCT TCTGTTAACT TTAAATCCGC 000560
000561 AAAGAGAGAG ATCTCTGCCA AGCAGCAACT GCAAGAGCAT GTGGGTCAAT GTTACCAGCA GACACTCAAA GCCCATTCCC 000640
000641 TTTACTTCAA CACCGCTTTA TAAATTATCT TAGAGACGTT GTCAGGTTGG TATTAGAGGT GAGTGGTCAT GACTTCACGA 000720
000721 TTTCTCATCT TTCTGAATGC ATAGTggctg ggagtggtgg ctcatgcctg taatcccagc agtttgggag gccgaggtgg 000800
000801 gcagattgtt tgaccacagg agttcgagac cagccggggt aacatggcaa gaccccaatc tctaccaaaa aaaaaaaaaa 000880
000881 aaaatacaaa aattgtctgg gtgtggtgtg catgcctgta gtcccaagtc ccagctactc tacttgggag gctgaggcag 000960
000961 aaggatcacc tgagcccagg aaggccaagg ctgcagtgag ccctgatggt gccactgcac ttgaccttgg gcaacagaat 001040
001041 gagaatgaga ccctgtcaaa aaaaaaaaaa aaaaaaaaaa gaaaaaaaaa aagaaagaaa aagagagaaa gagagagaaa 001120
001121 gaaagaaaga aaAGAATGCA TAGTGAGATT TTACAGTAAA ACTCTTTCTT AGAGGCTAAA AACTCTGGGG ATCTCACGAT 001200
001201 GTGGGTACAT TTCTAGAGAT AATATTTTAG ATCTCTATAG ATATTATTTT AATACATCTT TTTCTTTTTG GTTTGACTGT 001280
001281 GTATCATATG GCTTTTCTTC TTGGAAGTTA TCAAACTTCT CCCTAACTAA GGTCCTTGCA TATGCTGACC TGTTTGACAT 001360
001361 ACTCCCACTC TGGTCTACTC ATTCTTCAGG TATCATTTTC ATTCCTGTCA CTACCCCTTA ACCCAACCCA GACAAGGTTA 001440
001441 TTGTGCACTG AATCATTTCA AAATGCCACT TTAAAAATGA GTAAATATTT ATGTAATTAT GTGTTGAATA TACCTCCTCT 001520
001521 TTACAAGCAT ATAAGTCTAT GATACAAGTC TATGCTTGTC TCTTCTAATT CTGGTACATC ATGTGATATG AGAACCATGG 001600
001601 TAGGCAATCA ATAATGCAGA GACGAAATGT TTTTATCTTA GAGAGACTCT CACAGAAGTT TCTAGTTTAG AGATGCTTCA 001680
001681 CTGAAGTTTA TGGCCTCAAC TTCCTTGGGT CTTGATTACT ATCAGTGGAT GCAGTGATGG AGGGTAGGTA AAATCCAATG 001760
001761 TTATCTACAA GTTCTAGACT ACAgccaaca aactttttcc aaaataggcc agataataaa tatattaggt tttttgggcc 001840
001841 atgaagtctc tgctgcaact actcagctcc acatttgtag tggaaaagca gttatagatg aaacataaaa tgaattagtg 001920
001921 tggctgtgtt caaaaaaagc tattttcaaa aacagccagt gggaaagctt tggtccttga gccatagttt gcAAAATTTT 002000
002001 GTTCTAAACA GTAATTCCTT CACTGGAGAT TTTAAAAACA GAAAGAGAAT ACAGACAGCT ATACATGTTC TGGTCTATTC 002080
002081 CTGTTCTCTA GTATAGCAGC ACCTTAAAAT TGTATTACTA ACAGAGTACA GGAGATTGTA TGGAAGGCCT ATAGTGATGA 002160
002161 CTCTTTCATC AGCTTTGTTC GTAATAAATT AACTGTATGT GTTTCAGAGA GTCATATGAC TCCAAAATGA TTTAACACAT 002240
002241 GCTGCTACAA GCCAGCCTTC TTAAGTTTTT ATTAAATCTT GATTGTTTTG GTCACATAAT TTTTATATTA AATCCTGTGA 002320
002321 TACTCATTGT TTTTCTATAA AAATCATCAC ATTTCAAGTG TTAGGTAGTG TGTATAGAAC TGACAGGTAA TAATTTTGAC 002400
002401 AGGTATGGGA TTAAATAGAA TCCATCCAAA ACCATTTACT TTCCTTATAC ATTATAGCAG AAGTGGCTAA ATTAGAGGGT 002480
002481 TGTTCCTGTC TCCATCATGC ACTTCTGTCT TCTACTCCAT CCCTTGTATA TATTGGGGAT ATTTTGAGCC AAGTGCTAAC 002560
002561 GTTACTTACA CAGCTGATAT TTCAGATTAA TATGAATGCT GACCGTTTGC CCTCACAACA TGCCCACAAC ACATGGATTA 002640
002641 TACAGGGGAA TTAATCGTTA GCAATGAATT CAACATTTAG CTTTTAACAT TTTTATTCTG CCAGTAAGGC CAGAGAATAA 002720
002721 ATCTATTCTT TCTAGCAGGC AATTATTAAT CTCTGGCTTT CACAAACAGC AAACGGCCAC TGAATCCAGC TGACAGCATA 002800
002801 TATTTATTTA AAGATTAATA AGGAGAATTA TTTATATTAG TTAAAACGTA TTCTTCATTA TGTTTAAATC TTTCCAGAGC 002880
002881 TATGGCAGGA GTTGGATTGG AGTATACAGA ATGGATTAAC TTATTCTAAT TGTTATCTAA AGTAGAGGCA TTGAGCACtg 002960
002961 atatggtttg gctgtgtcct caaccaaatc tcatcttgaa tcagttccca taatccccac gtgtcaaggg cgggaccagg 003040
003041 tggaggtaac tgaatcatgg gaacggtttc cctcatgctg ttctcatgat agtgagtgag ttctcacaac atatgatggt 003120
003121 tttataagcg tctgtcattt ccgctgctgt tactcattgt ctctcctgat ggcctctgga gagatgcctt tgccatgatt 003200
003201 gtgagtttcc tgaggcttcc tagccatgtg gaactgtgag tcaattaaac gtcttttctg tataaattac ccagtcttgg 003280
003281 atatttcttc atagcagtgt gagaacggac t
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Predicted Small Protein

Name NONHSAT070045_smProtein_911:1171
Length 87
Molecular weight 9917.3584
Aromaticity 0.046511627907
Instability index 60.5756976744
Isoelectric point 10.2050170898
Runs 9
Runs residual 0.0349704963554
Runs probability 0.0453787120454
Amino acid sequence MPVVPSPSYSTWEAEAEGSPEPRKAKAAVSPDGATALDLGQQNENETLSKKKKKKKRKKK
RKKKRERERKKERKECIVRFYSKTLS
Secondary structure LLLLLLLLLLLHHHHLLLLLLHHHHEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH
HHHHHHHHHHHHHHHHEEEEEEELLL
PRMN -
PiMo -